Solidesulfovibrio magneticus: DMR_16970
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Entry
DMR_16970 CDS
T00917
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DMR_16970 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_16970 (mutM)
Enzymes [BR:
dma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DMR_16970 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DMR_16970 (mutM)
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DMR_16970 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Ribosomal_S13
DUF4350
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAH75188
UniProt:
C4XPK8
LinkDB
All DBs
Position
complement(1889812..1890657)
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AA seq
281 aa
AA seq
DB search
MPELPEVETIARALAPGLVGRVIVGVDVPDAKVLAGPKRRADFAAMAVGRTIQSVGRRAK
LLLLTLGPRPQVPGDGPAVLAFHLKMTGRFHIAPPGAPDPDRARLLVRLSDGNTLVFADL
RRFGTARVLTPEALSAWDFHASLGPEPWDMTPQAFEEALGRKSTRIKAALLDQTVIAGIG
NIYADESLFAARIRPDTPAKDLTPAQRQRLLKAVQNVIAAAIAAGGSTIRDYRTPDGVEG
GFQNHFQVYGKSGDPCPACAAPLTHAKIAGRTSTYCRKCQK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaaaccatcgcacgagccctggctccgggccttgtcggc
cgcgtcatcgtcggcgtcgacgtcccggacgccaaggtgctggccggccccaaacgccgg
gccgatttcgccgccatggccgtaggccggaccatccaatccgtcggccgccgggccaag
ctgctgctgctcaccctcggcccgcgcccccaggtcccgggcgacggcccggccgtcctg
gcctttcatctcaagatgaccggccgtttccacatcgcgccgccgggcgctcccgatccc
gaccgcgcccggttgctcgtccggctctccgacggcaacaccctggtctttgccgacctg
cgccgcttcggcacggcccgggtgctcacccccgaggccctgagcgcctgggatttccac
gcgtcccttggccccgaaccctgggacatgacgccgcaagccttcgaggaggcccttggc
cgcaagtccacccgcatcaaggcggcgctgctcgatcagaccgtcatcgccggcatcggc
aacatctacgccgacgaatcgctcttcgccgcccgcatccggcccgacacgccggccaag
gacctgaccccggcccaacggcaacgcctcctcaaagccgtccaaaacgtcatcgcggcg
gccatcgccgccggcggcagcaccatccgcgactaccgcaccccggacggcgtggaaggc
ggcttccagaaccatttccaggtctacggcaaatccggcgacccctgcccggcctgcgcc
gcgccgctgacccacgccaaaatcgccggccgcacgtccacctattgcaggaagtgtcaa
aagtaa
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