KEGG   Solidesulfovibrio magneticus: DMR_20400
Entry
DMR_20400         CDS       T00917                                 
Symbol
lhr
Name
(GenBank) Probable ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dma  Solidesulfovibrio magneticus
Brite
KEGG Orthology (KO) [BR:dma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dma03400]
    DMR_20400 (lhr)
Enzymes [BR:dma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DMR_20400 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     DMR_20400 (lhr)
DNA repair and recombination proteins [BR:dma03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DMR_20400 (lhr)
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C Lhr_WH ResIII DprA_WH AAA_25 PhoH DUF6406
Other DBs
NCBI-ProteinID: BAH75531
NITE: DMR_20400
UniProt: C4XRI6
LinkDB
Position
2297433..2301851
AA seq 1472 aa
MPFHPLTVEWFTAQVGRPTDIQSLAWPRIAAGEHVLAVAPTGSGKTLTAFLAALDALACG
RWPVGQTSVVYVSPLKALGGDIRANLARPLSGLRQAFAAAGREFPRIRAELRTGDTPADA
RRRMLRQPPEILITTPESLNLLLSSKGGRGMLGAVRLVILDEVHAVAGSKRGVFLMAAVE
RLALLAGEFQRVALSATVSPLAEAARFVGGLAPGPDGVLAPRPVAVVESRAAKVMNVRVE
YPDWSEREGSRDSFLAIVAGRIRRRIAANRTTLCFVNNRKLCEKLARLLNADRETPLAHA
HHGSLSKELRLAVETRLKAGELKAVVATHSLELGIDIGSVDEVLLIECPPTVSAAVQRIG
RSGHGVGEVSRAVFLPTSEKDLLEAAVMARAAAGRDIEPLRLVDAPLDVLAQVLVAMLGV
ETWNVDALFDAVRRIYAYRDLSRAAFDLTLGMLAGRYAATRLRELSPLVAIDALDGTASA
RAGALLRLYASGGVIADRGYYALRRQDSATRLGELDEVFVWEARLGQVFAFGAQNWRIER
ITDADVFVSPAPVGAVPAPFWLGDPRQRDRHFSGLVAAFLEEANARLDDPTYAEALATEH
FLDHQAAQALVGYLRRQKDVTGAALPHARHLLIEVTDTGPGGAPGNQVILHAPLGLVVTA
PLGLALEAALEARLGHAVPVYAGNDCLAVTLPGEVDPLEVLAAVPSRQAAALLRDRLEGS
GAFGAAFREAAGRALLLPRDGFGKRQPLWITRLRARKLLSAVAGYGDFPIVLEAWRTCLV
DLFDPQGLAGFLAAAQSGAMAVTVVRTRTQSPFAADIVWRHVTEYMYLTDAGTAAGPTGA
RPDLVAELTRRPDRPAVPEAVAQAFEARRQRLYPGYAPVSAAELLEYVKERVVVPGDEWQ
AMLAAMERDHGLAPAALEAALTPKLARLATPPQPGIVALERAAEAAEAVYGDAVLVQPLV
AKAKPPRRAKAASEDQSAVREGLIAQWLSYYGPRSLDDLVSRLGLDSAILQAVLEDLQAA
GNVVSGRLVTGRDEALWCDAANFETLLRLARAARRPALAALPPEKLPYFLAVWQGVAQPA
KDAAALAERLERLACLPLAAAAWEADVLPARALGYDPTLLDAALEDSGLRWFGAGTKKVL
FARPEDLDLAGFARRAPDAGLFPDPRASYDFSALLDITGLPPKTLAERLWQAAWKGEASC
PALSVLRRGVANDFTAEDAYAPIRSGSSHGGPVRRGFRRTPPGRFAGSLPLSGSWQALVP
PLLPDDPLAVEELAMDRARLLLARYGVVCRDMLARESAALSWTAVFRALRRMELTGEVVS
GEFFTGLSGPQFADPGAVRLLVAGLVGDAPWWIAGNDPAAVWGFGQDPAALALPRRTAGA
FVAFAGPRPVAVIEAGGARLRLALAPDDPGLPAALSPLVHLLCRRVSPLPRLTVATINDV
PADKSPYLAMLRSLFEVVGERRGVTLYRSRSL
NT seq 4419 nt   +upstreamnt  +downstreamnt
ttgccgtttcatccgctgactgttgaatggtttacggcccaggtcggccggcccacggac
atccagtccctggcctggccgcgcatcgccgctggcgagcatgtgttggccgtggcccct
accggctcgggcaagacgctcaccgcctttctggccgccctggacgccttggcctgcggc
cggtggccggtcggccagaccagcgtggtctatgtttcgccgctaaaagcccttggcggc
gacatccgggccaacctggcccggccgctttcgggccttcgccaggccttcgccgccgcc
ggccgggagtttccccgcatccgggccgaactgcgcaccggcgacaccccggccgatgcc
cggcggcgcatgttgcgccagccgccggaaatcctcatcaccacgccggaatccttgaat
ctcctgctcagttctaagggcggccgggggatgctcggggcggtgcggctggtcatcctg
gatgaagtccacgccgtggccggctccaaacggggggtgtttctcatggccgccgtggag
cggctggcgcttttggccggcgaattccagcgggtggccctgtcggccacggtatccccc
ttggctgaggcggcccggttcgtgggcgggctggctcccggcccggacggcgtcctggct
ccccggcccgtggccgtggtggagagccgggcggccaaggtcatgaacgtgcgggtggag
tacccggactggagtgagcgcgaaggctccagggattccttccttgccatcgtggccgga
cgcatccgccgccgtattgcggccaaccgcaccacgctgtgtttcgtcaacaaccgcaag
ctgtgcgaaaaactggcccggctgctcaacgccgaccgggaaacgccgctggcccacgcc
caccatggttcgctgtccaaggagctgcgcctggccgtggaaactcgcctcaaggccggc
gagctcaaggccgtggtggctacccattccctggagctgggcatcgacatcggttcggtg
gacgaggtcttgctcatcgagtgcccgcccacggtgagcgcggcggtgcagcgcattggc
cgctccgggcacggcgtgggcgaggtgagtcgggcggtgttcttgcccacttcggaaaaa
gatctgctggaagcggcggtcatggcccgagcggcggccggccgcgacatcgaacccctg
cggctggtcgatgcgccgctggatgtcctggcccaggtgctggtagctatgctcggggtc
gagacctggaacgtggacgcgcttttcgacgccgtgcgccgcatctacgcttaccgtgac
ctttcccgggccgctttcgatctgaccctgggcatgttggccgggcgctacgccgccacg
cgcctgcgcgaactctccccccttgtcgccatcgacgccctggacggcacggccagcgcc
cgggccggggcgctcttgcggctgtacgcctcgggcggggtcatcgccgaccggggctat
tacgccctgcgccgccaggattcggccacgcgcctgggcgaactcgacgaggtgttcgtc
tgggaggcgcggctaggccaggtgttcgcctttggcgcgcagaactggcgcatcgagcgc
atcaccgacgctgacgtgttcgtgtcgccggctccggtcggggccgtgccggctcctttt
tggctcggcgacccgcgtcagcgcgaccgccatttttccgggctggtggccgcctttttg
gaagaggccaacgcgcgactggacgatccaacctatgccgaagcgctggccacggagcat
tttctggaccaccaggccgcgcaagccctggtcggctacctgcgccgccaaaaagacgtc
accggtgcggccctgccccatgcccgccatctgcttatcgaggtgacggacaccggcccg
ggcggcgcgcccggcaatcaggtaatcctgcatgcgcccctgggattggtcgtcaccgcg
ccgctggggttggccctggaggcagccctggaagccaggctcggccacgccgtgccggtc
tatgccggcaacgactgcctggccgtcaccttgcccggcgaggtcgatccgctggaggtg
ttggctgccgtgccgtcacggcaggcggcggcgctgctgcgcgaccggctggaaggttcc
ggcgcgttcggagctgcctttcgcgaggcggccggccgggcgctgctgctgccccgcgac
ggcttcggcaagcgccagcccctatggatcacccggctgcgggccaggaagctcctttcc
gccgtggccggctacggcgatttccccattgtcctcgaagcctggcggacttgcctggtc
gatctcttcgatccccaggggctggccgggtttctggccgccgcccagtccggggccatg
gccgtgaccgtagtccgcacccggacccaaagcccctttgccgccgacatcgtctggcgg
cacgtcaccgaatacatgtacttgaccgacgccggcacggcggcgggccccaccggcgcg
cggcccgatctggtggccgagctgacccgccggcccgaccggccggccgtgcccgaggcc
gtggcccaggctttcgaggcccgtcgccagcggttgtatccgggctacgcgccggtgagt
gccgccgaactcctggaatacgtcaaggagcgggtcgtggtgcccggggacgaatggcag
gccatgctcgccgccatggagcgcgaccatgggctggccccggctgccctggaagccgcc
ctgacacccaagctggcccgcctcgccacgccgccccagccgggcatcgtcgccctggag
cgggcagccgaggcggccgaggcggtttacggcgatgcggtccttgtccagcccttggtg
gccaaggccaagccgccgcgccgagccaaggcggcgtccgaggaccaaagcgctgtccgg
gaagggctcattgcccaatggctgagctattacgggccgcgatccctggacgatttggtg
tcgcgtctgggcctggactcggcaatacttcaagcggtacttgaggatttgcaggcggcc
gggaacgtggtcagcggccgcctcgtgaccggccgggacgaagccttgtggtgcgacgcg
gccaatttcgagaccctgctgcgtctggcccgggcagcaaggcggccggcgctggccgcc
ttgccgccggaaaagctgccgtatttcctggccgtctggcagggcgtggcccaaccggcc
aaggatgcggcggccctggccgagcgcctggagcgtctggcctgtctgcctcttgccgcc
gccgcctgggaggccgacgtcttgccggcccgcgccctgggctacgacccgaccctgctc
gacgccgccctggaggactcgggcctgcgctggttcggcgcgggaaccaagaaggtgctt
tttgcccgccctgaagaccttgatctggccggttttgcccggcgcgcgcccgatgccggg
ctgtttcccgatccccgggcttcgtatgatttttcggcgctgctcgacatcaccggcttg
ccgcccaagaccctggccgagcggttgtggcaggcggcctggaagggcgaggcgtcctgc
ccggccttgtccgtgttgcgccggggcgtggccaacgacttcacggccgaggacgcctat
gcgccgattcgctccggctcgtcccacggcggcccggttcggcgcggtttccgccgcacg
ccgcccgggcgtttcgccggttcgctgccgctgtccggctcctggcaagcgcttgtcccg
ccgctgttgccggatgatcccctggccgtcgaggaactggccatggaccgggccagattg
ttgctcgcccgctacggcgtggtctgccgcgacatgctggcccgggagtccgccgccttg
agctggaccgccgtctttcgggcgctgcggcgcatggagctgaccggcgaggtcgtgtcc
ggcgaattttttaccggcctgtccggcccccagttcgccgatcccggagccgtgcgcttg
cttgtcgccggccttgtcggtgacgccccctggtggattgccggcaacgatccggccgcc
gtctgggggttcggccaggacccggccgctcttgccctgccgcgacgcacggcgggggct
tttgtcgcctttgccggcccgcgacccgtggccgtcattgaagccggcggcgcgcgcctg
cgtctggcccttgccccggatgatcccggactgccggcggcgttatcgcccctggtccat
ctcctgtgccgccgcgtttctcccctgccgcgcctgaccgtggcgaccataaacgacgtc
ccggccgacaaaagcccctacctcgcgatgttgcgcagcctcttcgaggttgtgggcgaa
cgccggggagtcactctgtatcggtcgcgttcgttgtag

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