Solidesulfovibrio magneticus: DMR_20680
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Entry
DMR_20680 CDS
T00917
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DMR_20680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_20680
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DMR_20680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
AAA_21
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
BAH75559
UniProt:
C4XS37
LinkDB
All DBs
Position
2333943..2336264
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AA seq
773 aa
AA seq
DB search
MESRTLSLLEFPKVLDRLAGYAASEPAAAACRALGPMGDAARLATEQRKLVEALELRRDR
AFEFTAFPDIEPLFAVLESERRVLDLDALVALSHVLSRVAALREALGREEGDSVLGAIVY
RTPWAKKTQAALARCLGPDGRLKDESSPELFSVRQEIRSIHQTILTKVKEFISERELGPL
LQDDYVTISSDRYVLPLRANFKGRLPGVIHDYSQTGETIYVEPFFLVEINNRLQELKNEE
REAEARVMAFLTGLARDERREVAASYRLLVDCDVLWAKAALCDAFGGTLPEVAQGRAVRL
LAARHPLLALAGPDSAVAQDLELAPDQRALIVTGANAGGKTVCLKTLGLLAAMALSGLPV
PAGEGSSLPFFAKIFVFLGDEQSLEDHLSTFTAQIRHLSRVWPDIDADTLVLLDEFGAGT
DPSQGAALAQAVVDGLLDRGAYLAAATHFPALKAYGLSREGVRAACMLFDPATKKPLYRL
AYDQVGASIALDVAREHGLPEDILERANRYLLLDGNDTGLVFDRLNDLALRREHELEAIA
AKRLAEEGKIQKLKDNLKKAQDKLVEEIRELSRDIVRRHEAGRLGRKEAQKALADVRKRL
IDESNELTGGPGGEAAAVAFDLSVVAPGDSVQVTSWNKIGVVREKDLKRQAAKVDIGGVS
LWVNVADLAPAAGKPAKAGGGAVVTPTASEAKGLGLVVDLRGMRADVAESELLAFVDNAL
LRGHGELEVIHGRGTGALRREVHRMLKDHPQVASFAIAPEDRGGDGMTMVTLK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagaactctttcgttgctggagtttccgaaggttttggaccggttggccggc
tatgccgcctcggaaccggccgccgccgcctgtcgggcccttgggcccatgggcgatgcc
gcgcgtttggccacggaacagcgaaagctcgtcgaggcccttgagctgcgccgcgaccgg
gccttcgaattcaccgcttttcccgacatcgagccgcttttcgccgtactcgaaagcgaa
cgccgggtcctggacctcgatgcgctggtcgctctttcccacgtgctgtcgcgggtggcc
gccctgcgcgaagccctgggccgcgaagagggcgactccgtactcggcgctatcgtctac
cgcacgccctgggccaagaagacccaggccgccctggcccgttgcctgggcccggacgga
cgcctcaaggacgaaagctcgcccgagcttttctccgtgcgccaggaaatccgctccatc
caccagaccatcctgaccaaggtcaaggagttcatctccgagcgcgagctggggccgctt
ttgcaggacgattacgtcaccatctcctcggaccgctacgtcctgccgctgcgggccaat
ttcaagggccgcctgcccggcgtcatccacgactattcccagaccggggaaaccatctac
gtggagccctttttcctggtggagatcaacaatcgcctccaggaactcaaaaacgaggag
cgcgaggccgaggcccgggtcatggcctttttgaccggcctggcccgggacgagcgccgg
gaagtggcggcctcctaccgcctgctcgtggattgcgacgtgctgtgggccaaggccgcc
ttgtgcgatgcctttggtggcacgctgcccgaggtcgcccagggccgggccgtgcgcctg
ctcgccgcccgccatcccctgctggccctggccggcccggattccgccgtggcccaggac
ctggaactggcccccgaccaacgggcgcttatcgtcactggggccaacgccggcggcaag
accgtctgtttgaagaccttggggcttctggccgccatggccctgtcggggttgcccgtg
ccggccggggagggcagcagcctgccctttttcgccaagattttcgtctttctcggcgac
gagcaaagccttgaggaccatttgtccaccttcacggcccagatccgccacctctcgcgc
gtctggccggacatcgacgcggacacgctggtgctccttgacgaattcggggccggcacc
gacccgtcccagggcgcggccttggcccaggccgtggtggacggtctccttgaccggggg
gcctatctggccgccgccacccactttccggcgctcaaggcctacggtctgtcccgggaa
ggcgtgcgcgccgcctgcatgctctttgatccggccaccaaaaagccgctctaccgtctg
gcctacgatcaggtcggggcgtccatcgccctggacgtggcccgggagcacggcctgccc
gaggacatcctggagcgggccaaccgctatctgctcctggacggcaacgacaccggactg
gtgttcgaccgcttaaatgacctggccttgcgtcgcgaacacgagctggaggccattgcc
gccaagcggctggccgaagaaggcaagattcaaaagctcaaggacaacttgaagaaagct
caggacaagctggtggaggaaatccgcgagctgtcccgcgacatcgtgcgtcgccacgag
gccggacgcctgggacgtaaggaagcgcaaaaggcccttgccgatgttcgcaaaagactt
attgatgaaagcaacgaattgaccgggggacccggaggcgaggccgcggctgtggccttc
gacctgtccgtcgtggctcctggcgattcggttcaggtgacaagctggaacaaaatcggc
gtggtgcgggaaaaagacctcaagcgtcaggccgccaaggtcgatattggcggcgtgagc
ctgtgggtgaacgtggctgatctggccccggccgccggcaaaccggccaaggccgggggc
ggtgcggtggtgacgccgacagcctcggaggccaaggggctggggttggtggtcgatttg
cggggaatgcgcgccgacgtggctgagagcgagcttttggcctttgtcgacaatgcgctg
ctgcgcgggcacggcgagctggaggtcatccacggtcggggcaccggggcgcttaggcgt
gaggtgcatcggatgctgaaggaccatccccaggtcgcgtcctttgccatcgctcccgag
gatcggggcggcgacggcatgaccatggtgacgctcaaataa
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