Solidesulfovibrio magneticus: DMR_21060
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Entry
DMR_21060 CDS
T00917
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma00541
Biosynthesis of various nucleotide sugars
dma01100
Metabolic pathways
dma01250
Biosynthesis of nucleotide sugars
Module
dma_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DMR_21060 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dma01005
]
DMR_21060 (hldD)
Enzymes [BR:
dma01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DMR_21060 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
dma01005
]
Core region
DMR_21060 (hldD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BAH75597
UniProt:
C4XS75
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All DBs
Position
2380913..2381884
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AA seq
323 aa
AA seq
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MIIVTGGAGFLGSGLVWGLNAAGYDDILVVDNLGHGDKWKNLVNRRFADYLHKDAFLEAI
AEAKDPFGATSVIHLGACSATTETDAEYLMRNNTAYTKAVARYALEAGARLVVASSAATY
GDGSLGFDDDPGGLGALKPLNMYGYSKHLFDLWARREGLLGQLASLKFFNVYGPNEYHKA
DMRSVVCKAYAQIGKTGRLSLFKSSRADYPDGGQKRDFLYVKDAVAVMLWLLEHPEVGGV
YNVGSGAARTWNDLAAAVFSAMGKALAVDYIPMPEAIRGKYQYFTEAKMDRLHAAGCANS
FMTLEEGVADYVKGYLSQPDRYL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtcacgggcggggccgggttcctgggcagcgggctggtgtgggggcttaac
gccgccgggtacgacgacattttggtggtggacaacctggggcacggcgacaaatggaaa
aatctcgtcaatcgccgttttgccgactacctgcacaaggacgcctttttggaggccatc
gccgaggccaaggacccctttggggccacgtccgtcatccatctcggggcttgctccgcc
accaccgagaccgacgccgagtatctcatgcgcaacaacacggcctataccaaggccgtg
gcccgctatgccctggaggccggggcgcggctggtcgtcgcttcctcggccgccacctac
ggcgacggcagcctggggtttgacgacgacccgggcggcctgggcgcgcttaagccgctc
aacatgtacggctattccaagcatctcttcgacttgtgggcgcggcgggaaggcttgttg
gggcaactggccagcctcaagttcttcaacgtctacggccccaacgagtatcacaaggcc
gacatgcgatcggtggtctgcaaggcctacgcccaaatcggcaagacgggccggctgtcg
ctgttcaagtccagccgggcggactatcccgacggcggccagaagcgggattttctgtac
gtcaaggacgccgtggccgtgatgctgtggctgctggagcatcccgaggtgggcggggtc
tacaacgtgggcagcggcgcggccaggacctggaacgatctggcggctgcggtcttttcg
gccatgggaaaggccctggccgtggactacatccccatgcccgaggccatacgcggcaag
taccagtatttcaccgaggccaaaatggatcggctgcacgccgccggctgcgccaactcc
ttcatgactctggaagagggcgtggccgactacgtgaagggctacctgtcccagcccgac
cgttatctttag
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