Solidesulfovibrio magneticus: DMR_21220
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Entry
DMR_21220 CDS
T00917
Name
(GenBank) decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma00300
Lysine biosynthesis
dma00470
D-Amino acid metabolism
dma01100
Metabolic pathways
dma01110
Biosynthesis of secondary metabolites
dma01120
Microbial metabolism in diverse environments
dma01230
Biosynthesis of amino acids
Module
dma_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DMR_21220
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DMR_21220
Enzymes [BR:
dma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DMR_21220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BAH75613
UniProt:
C4XS91
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All DBs
Position
2400027..2401280
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AA seq
417 aa
AA seq
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MEAIKRALADGWFREQDTAVVLYDLDALTARVEALTSAFPAETVHAFAVKACPLPPVLAM
LAQLGLGAEAASLGEIHLALAAGFPSERIVFDSPAKTVEELRLALSLGLFVNADNLDELD
RLDDLGRDMGLVPRAGLRINPQAGTGRIKATSVAGRYSKFGVPLPQREAIVDAFGRYPWL
SGLHVHIGSQGCPLELLVAGVGAVYDLAADLDARFGPGRVAVFDLGGGLPAAYRDADRPP
SPQAYFEALRVRCPGLEGNQRRLVTEFGRMMAAPCAVAASRVEYVKRQPGHRTAVMHLGA
DMFVRECYNPRFWPHRTRLLGAHGLEKQGKPVLHHLAGPLCFSGDFPVRRAMLPEATAGD
IVVIEDVGAYTLSMWSRYNSRQMPRVLGLRQGHFSVLREREEPEDLVQFWLGGSMSA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaagctattaaacgagctttggccgacggctggttccgggaacaggataccgctgtg
gtgctctacgacctggacgccctgacggcccgggtcgaggcgctgacaagcgcctttccc
gccgaaaccgtccacgcctttgccgtcaaggcctgcccgctaccgccggtgttggccatg
ctggcccagctcggcctgggggccgaggcggcgtcccttggcgaaattcatctggccctg
gctgccggctttccgtccgagcgcatcgtcttcgactccccggccaagaccgtggaggag
ctgcgcctggccctatcccttgggcttttcgtcaatgccgacaacctggacgaactggac
cgcctggacgacctggggcgggacatgggcctcgtgccccgggccgggctgcggatcaat
ccccaggccggaaccgggcgcatcaaggccaccagcgtggctgggcgctattccaagttc
ggcgttcccctgccccagcgtgaggccattgtcgacgccttcggccgctatccttggctt
tcgggcctccatgtccacatcggttcccagggctgccccctggaacttctcgtggccggc
gtgggcgcggtttacgaccttgccgccgacctcgacgcccggttcggtccggggcgcgtg
gctgtcttcgatctcggcggcggccttcccgccgcctaccgcgacgcggaccgtccgccc
agcccccaagcctacttcgaggcgctgcgtgtccgttgtcccggcctggagggaaaccag
cgccggctggtcacggaattcggccgcatgatggccgcgccttgcgccgtggccgccagc
cgggtggaatacgtcaagcgccagccgggccatcgcacggcggtcatgcacctgggcgcg
gacatgttcgtacgcgaatgctacaacccgcgcttctggccccatcgcacccgtttgctc
ggcgcgcacggccttgagaaacaaggaaaacccgtgctgcaccatctggccgggccgttg
tgtttttccggggattttcccgtgcgtcgggccatgttgcccgaggcaacggcgggggac
atcgtggtcatcgaggatgtcggggcctacaccctgtccatgtggtcgcgctacaacagc
cggcaaatgccgcgtgtgctggggctgcggcaagggcatttttcggtgttgcgcgaacgg
gaggaacccgaggatctggtgcagttttggcttggcgggagcatgtcggcgtaa
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