Solidesulfovibrio magneticus: DMR_23390
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Entry
DMR_23390 CDS
T00917
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dma
Solidesulfovibrio magneticus
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dma03009
]
DMR_23390
Enzymes [BR:
dma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DMR_23390
Ribosome biogenesis [BR:
dma03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DMR_23390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BAH75830
UniProt:
C4XSY8
LinkDB
All DBs
Position
2624834..2625802
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AA seq
322 aa
AA seq
DB search
MDATDSRLTRINKALASAGVCSRRHADDLIAAGRVTVNGAVVTEAGLRIDPARDALAVDG
APVNLAPEIPITLALHKKPGVVTTASDPEGRPTVFDGLPEVWRGKRLFPVGRLDFFSEGL
LLLTTDGELALRLTHPRWHVPKRYRVTVRGQVTPDMLGTMARGMRLAEGERLAPVAARVV
EGPAQDRSILEMELHQGVNRQIRRMCRDLGLTVLRLARVSQGPVALGDLPLGACRELTPA
ELATLRQSVGLDDADVAPAPPRPRPTAEGDTKRPPRPARPPQAGGKRPATKASGGETETG
PRRDGQSAPRRDRPARRRGQSS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgacggattcgcgcctcacgcgcatcaacaaggccctggcttcggctggggtg
tgttccaggcgtcatgccgacgacctgattgccgccggacgggtgacggtcaacggggcc
gtggtcaccgaggccgggcttcgcatcgaccctgcccgcgacgccctggccgtggatggc
gcgccggtcaacttggccccggaaatcccgataaccctggcgctgcataaaaagccgggc
gtggtgaccacggccagcgaccccgaaggccggcccacggtctttgacggcctgcccgag
gtgtggcgcggcaagcgccttttcccggtggggcggctggactttttttccgaaggtttg
cttttgctcaccaccgacggcgagctggccctgcgcctgacccatccgcgctggcacgta
cccaagcgttaccgggtcaccgtgcgcggccaggtgacgccggacatgctcgggaccatg
gctcggggcatgcgtctggccgagggcgagcgcctggctccggtggccgcccgagtggtc
gaagggccggcccaggaccgatcgattcttgaaatggagctgcatcaaggcgtcaatcgc
cagatccggcgcatgtgccgcgatttgggcctgaccgtgctgcgtctggcccgggtcagc
caggggccggtggcgctgggcgacttgccgctcggggcctgccgcgaactgacgccggcc
gaactggccaccctgcgccagtcggtgggtttggacgatgcggatgtcgcaccagccccg
cccaggccccggccgacagccgaaggcgacacaaaacgcccgccgcgtccagcccgtccg
ccccaggccggcggcaaacggccggcaaccaaggccagcggcggcgagaccgagacagga
ccgcgccgtgacgggcagtctgcgccgcgccgcgaccgccctgcccgacgtcgcggccaa
tcttcgtaa
DBGET
integrated database retrieval system
