Solidesulfovibrio magneticus: DMR_32280
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Entry
DMR_32280 CDS
T00917
Name
(GenBank) putative ABC transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DMR_32280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dma02000
]
DMR_32280
Enzymes [BR:
dma01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DMR_32280
Transporters [BR:
dma02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DMR_32280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_16
nSTAND3
AAA_29
RsgA_GTPase
AAA_30
TM_HPP
AAA_25
DO-GTPase2
AAA_23
AAA_15
AAA_18
TsaE
nSTAND1
NB-ARC
cobW
Motif
Other DBs
NCBI-ProteinID:
BAH76719
UniProt:
C4XJG9
LinkDB
All DBs
Position
3641073..3642869
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AA seq
598 aa
AA seq
DB search
MNKATTSDLNIARRFAAFLKSYTWQIIFALTCALCSSAAGIALPLLAGSLINKLQETTQV
SSFFNLHNLELWSLVSVFAFQAVCSYCQVVYTSRISEGVVRDIRIAAFSGLLKKEMLFFD
QIKVGDVSSRVSKDVNDVQELYTESFQDIFLSIIEIFGSISAMLYISWKMTLLTLCVAPL
SAALVLYYRNRFRMLARSQARLMGDISSHAQEASTHIRIIRAFGAETVELKRMLSVCDKF
YTSGISLAKVFASQTVASRVLVWVAIFFVMLYGFYLIALGDMNSGQLVAFLILAYKSTQP
VLHVSYIVNNMQRSLAAASRVYSLLEDNLPSRSLNQPLSFVPFNPQGQISFDRVNFSYCG
EDVLNDVVFSVDKGEFVALVGPSGAGKTTILKLLLGFYSPSSGRILLDDVDISRVDPAIL
RSAIAYVPQESMLFNRSIYENIAYGNNSASFAEIESAAKNAGALDFIRTLPQGFDTMVGE
LGARLSGGERQRIVLGRAFLRNPKILLLDEPTSNLDSNNEALLKDNIKELAKGRTTVMVA
HRFSTIEHADRVIVINSGRVIESGSPQQLIQQRGLFYQMRMSSSKIEDLPMPAVSVAD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagccacaacatctgatctaaatattgcccgaagatttgccgcatttttaaaa
tcttacacttggcaaataattttcgcactgacatgcgcactgtgctcaagcgctgctgga
attgcattgccattacttgccgggtcattaatcaataaacttcaagaaacaacacaggtt
tctagttttttcaacctccacaacttagaactgtggagtcttgttagcgtgttcgctttt
caagctgtgtgcagctattgtcaagttgtttatacctcgagaatatcggagggggttgtt
cgcgacattcgaatcgcagcattttctgggctactaaaaaaagaaatgctgttttttgac
caaattaaagttggagatgtgtcttcacgtgttagcaaagatgtgaatgatgttcaagaa
ttgtacactgaaagtttccaggatatctttctgagtattattgaaatattcggttcaata
tctgcaatgttgtatatctcttggaaaatgacgttattaactttgtgtgttgccccgctc
tctgcagcgcttgttttgtattatcgcaatcgttttcggatgttggcaagatcgcaagct
agactcatgggtgatatcagttcgcacgcgcaagaagcttcaacccatatacgtattatc
agagcatttggagccgagactgtcgaactaaaaagaatgctatctgtttgcgacaaattt
tacacttcaggtatttctttagcgaaagtttttgcatctcagactgtagcaagtcgcgtt
cttgtatgggtagctattttttttgtgatgctctacggattttatttaatagctctagga
gacatgaatagcgggcagcttgttgcatttttgatattggcttataagtcaacgcagccc
gtactgcacgtaagttacattgtaaacaatatgcaaaggagtctagccgcagcaagccgc
gtctattctctgcttgaagacaacttacctagtcggtcattgaatcagccattgtctttt
gtgccatttaatccccagggacagatatcgtttgatcgggtgaatttttcttattgtggt
gaagatgttttgaatgatgtagttttttcggtcgacaaaggtgagtttgtagctttagtt
ggaccatctggagcaggaaagactacgatacttaaactgttgcttggattttattctcct
tcgagtggacgaattttacttgacgacgtcgacatatcaagagttgaccctgctatattg
cgctcggcgatagcatatgttccacaagaatctatgcttttcaatagaagtatatatgag
aacatagcatatggaaacaactcagcgtcttttgcagagattgaaagcgctgctaaaaat
gcaggggctctcgactttataagaacattacctcaaggttttgacaccatggttggcgaa
cttggcgctagactctctggcggcgagcgacaaagaatagtgcttggaagagctttttta
cgaaatccaaaaatattgctactggatgaaccgacttcaaatctagactctaacaatgaa
gcattgcttaaagataacattaaagaactggcaaaaggtcgaacgactgtcatggtcgca
cacaggttctcgacaatagaacatgcagatcgtgttattgtcataaattcaggacgtgtc
atagaatcaggaagccctcagcaacttatacagcaacgcggattgttctatcaaatgaga
atgtcgtcatctaagatagaagacttacccatgcctgctgtgagtgttgcagattga
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