Solidesulfovibrio magneticus: DMR_35960
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Entry
DMR_35960 CDS
T00917
Name
(GenBank) putative peptide ABC transporter substrate binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DMR_35960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dma02000
]
DMR_35960
Transporters [BR:
dma02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DMR_35960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
PPTA
Motif
Other DBs
NCBI-ProteinID:
BAH77087
UniProt:
C4XLE8
LinkDB
All DBs
Position
complement(4070016..4071707)
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AA seq
563 aa
AA seq
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MRPAHAAFLVLVLGSLLLGGCDGPSKPEEKAAKSAAASATAQTAAPQPPAAPAGQPETGG
RIVMATIGEPSNLIPYLASDSASHEVADLLYVSPLRYDKDIKLECFAAERYEVAEDGKLL
KFWLRPGIRWTDGVELTAQDVEFTYKLMIDPKTPTAYAEDYKVISSFTVTGKYSFEVRYA
EPFARALVTWAGSILPKHLLAGQDMMTTKYAREPIGCGPYILDKWEPGKSLTLRYNPDYF
EGRPNIDQVVYRIIPDTSTMFLELKAGNLDMMGLTPQQYLYQTTGQAWDADWRKYKYLSF
GYTYLAYNLKSPYFTDARVRRALAQAVNKESIIKGALLGLGVPTIGPYKPGSWVYDTTIT
DYAYDPAKAKALLAEAGWTDRNGDGVLEDASGRPFSFTILTNQGNEQRIKAATILQSELG
AIGIKVGIRTVEWASFLKEFVDKGNFDAVVLAWSIAQDPDNYSVWHSSSAVPGGLNFIGY
KNPEVDALLERGRRTLDQAERKKAYDAFQKILHEDQPYMFLYTPYSLPILTARIQGVVPA
PAGISYNFTKWWIPRDKQTFRLE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccggcgcacgcggcatttctcgtcctggtcctgggatcgcttctgcttggcggc
tgcgacggcccgtccaagccggaggaaaaagcggccaagtcggccgcggcctcggcgacg
gcacagacggccgcccctcagccgccggccgcgccggccggccagcccgagaccggcggc
cgcatcgtcatggccaccatcggcgagccgtccaacctcatcccctacctggcctcggat
tcggcctcccacgaggtggccgatctgctctacgtgtcgcccttgcgctacgacaaggac
atcaagctcgagtgcttcgccgccgagcgctacgaagtggccgaggacggcaagctcctc
aagttctggctgcgccccggcatccgttggaccgacggcgtggaactgaccgcgcaggat
gtggaattcacctacaagctcatgatcgacccgaaaacgcccacggcctacgccgaggat
tacaaggtcatctccagcttcacggtcaccggcaagtattcctttgaggtgcgctacgcc
gagccttttgcccgggcgctggtcacctgggccggttccatcctgcccaagcatctgctg
gccggccaggacatgatgaccaccaagtacgcccgggagcccatcggctgcggcccctat
atcctggacaaatgggagccgggcaagagcctgaccctgcgctacaatcccgactacttc
gaaggccggcccaacattgatcaggtggtctaccgcatcatcccggacacctcgaccatg
tttctggagcttaaggccggcaacctggacatgatgggcctgaccccccagcagtacctc
taccagaccacggggcaggcctgggacgccgactggcgcaagtacaagtacctgtccttt
ggctacacctatctggcctacaaccttaaaagcccgtatttcaccgacgcccgggtgcgc
cgtgccctggcccaggccgtcaacaaggaaagcatcatcaagggcgcgctgctgggcctt
ggcgtgcccaccatcggcccctacaagcccgggtcctgggtctacgacaccaccatcacc
gactacgcctacgacccggccaaggccaaggcgcttctggccgaggccggctggaccgac
cgcaacggtgacggcgtgctggaagacgcctcggggcggcccttttccttcaccatcctc
accaaccagggcaacgaacagcgcatcaaggccgccaccatcctgcaaagcgaactgggg
gccatcggcataaaggtcggcatccgcaccgtggagtgggcctcgtttctcaaggaattc
gtggataaggggaacttcgacgccgtcgtgctggcctggtccatcgcccaggacccggac
aattacagcgtctggcattccagcagcgccgtgcccgggggactcaacttcatcggctac
aagaatcccgaggtggacgcgctcctggagcgcggccggcgcaccctggatcaggccgag
cgcaagaaggcctacgacgccttccaaaagatcctccacgaagaccagccctacatgttt
ctctacacgccctacagcctgcccatcctcaccgcccgcatccagggcgtggttccggcc
ccggccggcatcagctacaacttcaccaagtggtggattccccgcgacaagcagaccttt
cgtctggaatag
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