Solidesulfovibrio magneticus: DMR_35980
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Entry
DMR_35980 CDS
T00917
Name
(GenBank) putative helicase
Organism
dma
Solidesulfovibrio magneticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
AAA_22
SWIM
Motif
Other DBs
NCBI-ProteinID:
BAH77089
UniProt:
C4XLF0
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All DBs
Position
4071986..4075213
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AA seq
1075 aa
AA seq
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MANGNDETKIKALLGEFVRETVPEYILDGAHAIVAGGGIQKLTVNRHDNFWDVEGQVQGD
DFQVYASELSVNLREGNINFFCNCPDSFSGVCRHVGATALKCLRTLDEASGDGETSDSAA
HAARGEWRQTFRTYFSTEPEPEPGRHYLIFRFHPEPGRLQVAFFRARQNKSGISQVHSEI
TLEQIIKNPDWSELSPTLPVVAEMLEHHLDYAGHRVEIPPGLLAWFFWAIGKEYYLYWRD
TEQPVRIESKTMRLQLAPRLQEDGLSFDILLGSPGKSPFSILGQEVYFYGQMPIWVCWKN
AFYPVQTGLPPQLVSDMTQNPPFIPTADVSEFLDRVWTHLPMTDLYGQEEFLVKMQPFFV
PANFDPKIFLDEEGSLLTLQIQNVYQTEHGEITVPGPNPDLMTASYLHDGKSYLIARDCD
QEQALISMLAEMRFQARNNANWFLETEEAIVFLLDAYPKLIEKYRVFGEKNLTRYKVRLS
TPVIVAEVESKEEEKWFNLDLQVQYDDQRVPIEKIWKAWTQGKRYVQLKDGSYTSLPESW
LEKLAHKLRALGYDTDKPPQTKFKQFEAPVLDKLLEDMPEARTDSFWNNLRQKIHSFREI
VQVRPPKGLNATLRPYQVQGLSYLNFLREYGFGGILADEMGLGKTVQTLSFIQHNVERGA
IGPNLIVVPTSVLPNWEREAQKFVPDLKQLIIYGARRENMFRRIAESDLVITTYALLRRD
LDELLKYEFASIILDEAQNIKNPNTITARAVRRLAGKTRLCLSGTPIENNLFELWSLFEF
LMPGFLGGQNAFQRGIVKPIKDGDAETLDYLRGRVKPFILRRTKNEVAKDLPPKVENTYY
CNLLDEQLELYAALAKKLKEQVLATVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDLP
GVNTNLPSGKFDAFKDLITDCIEEGHKVLVFSQFVQMLHIIRSWMSISQMPFCYLDGSSK
DRFDQVDKFNQTEDIKVFLISLKAGGTGLNLTSADYVIHYDPWWNPAVENQATDRTHRIG
QLRQVFSYKLICQNTVEEKILKLQEQKKDVAEAVIPGQDAFKSLTRTDLESLFDV
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggccaacggaaacgacgaaaccaaaatcaaagcgttgctcggggaattcgttcgcgaa
accgtccccgagtacatcctggacggcgcccacgccattgtggccggcggcggcatccag
aagctcacggtcaaccggcacgacaacttctgggatgtggaaggtcaggtccagggtgac
gatttccaggtctacgcctcggaactttcggtcaacctgcgtgaaggcaacatcaacttt
ttctgcaactgtccggattccttctccggcgtgtgtcgccatgtcggggccacggcgctc
aaatgcctgcgcaccctggacgaggcctccggcgacggagagacgtccgacagcgcagcc
cacgccgcacgcggagaatggcggcagaccttccgcacctatttttccaccgagcccgag
cccgaacccggccgccactacctcatcttccgcttccaccccgagcccggccggctccag
gtggcctttttccgggccaggcagaacaagtccggcatctcccaggtccactccgagatc
accctggagcagatcatcaagaacccggactggtccgagctgtcccccaccctgcctgtc
gtggccgagatgcttgagcaccacctcgactacgccggccaccgggtggaaattccgccc
ggactgctggcctggtttttctgggccatcggcaaggaatactacctctactggcgcgac
accgaacagcccgtgcgcatcgagtccaagaccatgcgcctgcagctggcccccaggctc
caggaagacggcctgtcctttgacatcctgcttggcagcccgggcaagtcgcccttttcc
atcctcggccaggaggtctatttctacggccagatgcccatctgggtgtgctggaaaaac
gccttctatccggtccagaccggcctgccgccccagctcgtgtcggacatgacgcaaaat
ccgccctttatccccaccgccgacgtgtcggaattcctcgaccgggtgtggacccatctg
cccatgaccgacctgtacggccaggaagagttcctggtcaaaatgcagccgtttttcgtg
ccggccaacttcgatccgaagatcttcctcgacgaggaaggaagcctccttactctgcaa
atccagaacgtctaccagaccgagcacggcgagatcacggtccccggccccaaccccgat
ctcatgaccgcctcgtatctccacgacggcaaatcgtatctcatcgcccgggactgcgac
caggagcaggcgcttatttccatgctggcggaaatgcgcttccaggccagaaacaacgcc
aactggttcctggaaaccgaggaagccattgtctttttgctcgacgcctaccccaaactc
atcgagaagtatcgggtctttggcgaaaagaacctgacccgctacaaggtacgcctgtcc
accccggtcatcgtggccgaagtggagtccaaggaagaggaaaagtggttcaacctcgac
ttgcaggtgcaatacgacgaccagcgtgtgcccatcgagaagatctggaaggcctggacc
caaggcaagcggtatgtccagctcaaggacggctcctacaccagcctgcccgaatcgtgg
ttggaaaagctcgcccacaagctgcgggccctgggctacgacacggacaagccgccccag
accaagttcaagcagttcgaggccccggtcctggacaagctcctggaggacatgcccgag
gcccgcaccgactcgttttggaacaacctgcgccagaagatccacagcttccgcgagatc
gtccaggtgcggccacccaagggcttaaacgccaccctgcggccctatcaggtccagggg
ctttcctacctcaatttcctgcgcgaatacggtttcggcggcatcctggccgacgaaatg
ggcctgggcaagaccgtccagaccctgtcgttcattcagcacaacgtcgagcgcggggcc
attggccccaacctcatcgtcgtgccgacctcggttttgcccaactgggagcgcgaggcc
cagaaattcgtgcccgacctcaagcagctcatcatctacggggcacggcgcgaaaacatg
ttcaggcgcatcgccgaatccgacctcgtcatcaccacctacgcgctcctgcgccgggac
ctcgacgagctgctcaaatacgaattcgcctccatcatcctcgacgaagcccagaacatc
aagaaccccaatacgatcaccgcccgggccgtgcggcgtctggccggcaagacccggctt
tgcctgtccggcacgcccatcgagaacaacctcttcgagctgtggtcgctgttcgagttt
ctcatgccgggcttcctcggcggccagaacgccttccagcgcggcatcgtcaagcccatc
aaggacggcgacgccgaaacccttgattacctgcgcggccgggtcaaacccttcatcctg
cggcgcaccaaaaacgaggtggccaaggatctgccgcccaaggtggaaaacacctactac
tgcaatcttcttgacgagcagttggagctttacgccgccctggccaaaaagctcaaggaa
caggtgttggccaccgtcgatgaaaagggcatggccaagtcgcagatgtcgattctcgac
gcgctgttaaagctgcgccagatctgctgccacccgcgcctgctcaagctcgacctgccc
ggcgtcaacaccaacctgccctcgggcaagttcgatgccttcaaggacctcatcacggac
tgcatcgaggaaggccacaaggtgctggtcttttcccagttcgtgcagatgctccatatc
atccggtcctggatgagcatcagccagatgccgttttgctacctcgacggttccagcaag
gaccgcttcgatcaggtggacaagttcaaccagaccgaggacatcaaggtgttcctcatc
tccctcaaggccggcggcacggggcttaacctcaccagcgccgactacgtcatccactac
gacccgtggtggaacccggccgtggaaaaccaggccacggaccgcacccaccgcatcggc
cagttgcgccaggtcttctcctacaagctcatctgccagaacacggtggaagaaaagatc
ctcaagctccaggaacagaaaaaggacgtggccgaggccgtcatccccggccaggacgcc
ttcaagtccctcacgcgcaccgacctggaatcgctttttgacgtctag
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