Solidesulfovibrio magneticus: DMR_36430
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Entry
DMR_36430 CDS
T00917
Name
(GenBank) helicase RecD/TraA family protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DMR_36430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_36430
Enzymes [BR:
dma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DMR_36430
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DMR_36430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
Helicase_RecD
AAA_28
AAA_22
UvrD-helicase
HHH
nSTAND3
PhoH
NPHP3_N
SLFN-g3_helicase
AAA_16
AAA_24
ABC_tran
DEAD
RsgA_GTPase
AAA
Mg_chelatase
T2SSE
AAA_29
ATPase_2
TsaE
MeaB
AAA_23
HHH_2
Pox_A32
Rad17
NB-ARC
cobW
Zeta_toxin
TrwB_AAD_bind
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAH77134
UniProt:
C4XM06
LinkDB
All DBs
Position
4125454..4127625
Genome browser
AA seq
723 aa
AA seq
DB search
MELVDLQGQIERVTYTNEENGYTIAKVKVYGRRDLVTVCGNILCPTPGEIIKMKGEWANH
PKFGEQFKLAYYKTTTPASVHGIEKYLGSGLIKGIGPVMARRIVKLFGEATLDVIEADIQ
KLVEVPGIGSKRVGMIGQAWEEQKEIRSVMLFLQTHGVSSGYATKIYKQYKNESIAVVQE
NPYRLAHDIFGIGFVTADKIAQKLGFDKNSPLRAEAGILYVLHQLSDEGHVFYPREPLIE
KANEILEVETAVLADAIARLASDKKVVCETLNADSGPIDAVYLAKYHLSENQVAARLKAL
MVAPKGVRTIDAPKAVEWVQEKLSMALAKKQVEAVKAAATSKVLVITGGPGTGKTTIIRA
ILKIFSAITKHILLAAPTGRAAKRMSEATGHEAKTLHRLMEYSIQKCGFQKNEDHPLDCE
LIVVDEASMIDLILMHHLLKAIPKPATLILVGDVDQLPSVGAGNVLKDVIASGTIPVVEL
NEIFRQAQKSSIIVNAHKINRGVMPDLRPKMEGDDFYFVEEDEPERALQRIIQLVKERIP
IKFGLDPIDDIQVLTPMNRGLVGTSNLNSALQESLNPRGEEIARGGRTFRVGDKVMQIKN
DYDREVFNGDIGRIVKIDSEEQEVIVVVDGRDVKYEYTDLDELVLAYGVSIHKSQGSEYP
AIVIPIMMQHYIMLQRNLTYTGITRGRKLVVLVGQKKALGIAVRNNKTLFRNTHLNKRIA
LAK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaactagtagatctccagggccagattgaacgtgtaacgtacaccaacgaagagaat
ggttatactattgccaaagtgaaggtctatggacgacgtgaccttgtaactgtttgtggt
aacatcctttgcccaacccctggcgagatcataaaaatgaagggggagtgggcgaaccac
ccaaagttcggcgagcagttcaaactcgcctactacaaaacgactacccccgcctctgtc
cacggaatcgaaaaataccttgggtcgggtctgatcaagggcatcggcccagtcatggcc
aggcgcatcgttaagttgttcggggaggccacgctggacgtcattgaggcggatatccag
aagcttgttgaggtgccgggcatcggctccaaacgggtcggcatgatcggtcaggcgtgg
gaagagcagaaagaaattcgctccgtcatgctgtttcttcagacccatggggtcagctcc
ggatacgctacgaaaatctacaagcagtataaaaacgaatccattgccgtggttcaggag
aatccttaccggctggcccacgatattttcggcataggcttcgtcactgcagacaaaatc
gcgcagaagcttggcttcgataaaaactcgccgctccgggccgaggccggcatcctctac
gtccttcaccaattgtccgacgagggacacgtcttttacccccgggaaccattaatcgag
aaagccaacgagatcctggaggttgagacggccgtccttgctgatgcgattgccaggttg
gcctcggacaagaaggtcgtctgcgagaccttgaatgccgacagtggtcccatcgacgcc
gtttatctcgctaaataccatctttcggagaaccaggtcgccgctcgcctgaaggccctc
atggtagccccaaagggtgtccgcaccattgatgccccaaaggccgtggaatgggttcag
gaaaagctgtcgatggcactggcgaagaagcaagtcgaagcggtcaaggccgcagccacg
agcaaggtcctggtcattaccggagggccggggacgggcaaaacgacaattatccgtgcc
atcctgaaaatcttctccgcgatcaccaagcacatcctactggcagcaccgacaggccgt
gcggcgaagcgcatgtccgaagccaccggccatgaagccaagaccctgcaccggttaatg
gaatattccattcaaaaatgcgggttccaaaagaacgaggaccaccccctcgactgcgag
ctgattgttgtggatgaggcgtccatgatcgatctcatcctgatgcaccacctgctcaag
gccataccgaagccggccacactgattttggtgggtgacgttgaccagttgccctcggtt
ggagccggcaacgtgctcaaggacgtgatcgcctctggaaccattcctgtcgtggaactg
aacgagatcttccggcaggcccaaaaatcctccattatcgtcaatgcccacaagatcaac
aggggtgtcatgcccgacctccggccgaaaatggagggcgacgatttttactttgtcgag
gaggacgaacccgaacgagcgctgcagcgaataatccagctggtcaaggaacggattccg
ataaagtttggtctggacccgatcgacgacatccaggtattaactcccatgaaccgtggc
cttgtcgggacgtcaaacctgaatagcgcacttcaggaatcccttaatccccggggggag
gaaatcgctcgtggaggacggacgttccgggtgggcgacaaggtcatgcaaataaaaaat
gattacgaccgtgaagtatttaatggtgacatcgggcgaatcgtaaaaattgattcagaa
gaacaagaggtaattgtcgtcgttgatgggcgagacgtgaaatatgagtacacagacctt
gacgaactagttcttgcctatggcgtgtcgattcacaaatcgcagggatctgagtatcca
gcaattgttatcccgataatgatgcaacactatataatgctacaaagaaatttgacatat
actggaattactcgaggaaggaaacttgttgtcctcgttggccaaaagaaagcacttggc
atagccgtcaggaacaataagacgctattcagaaacactcatctgaacaaaagaatagca
ctggcgaaatag
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