Solidesulfovibrio magneticus: DMR_41560
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Entry
DMR_41560 CDS
T00917
Name
(GenBank) putative D-ribose-binding periplasmic protein precursor
KO
K10439
ribose transport system substrate-binding protein
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma02010
ABC transporters
dma02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DMR_41560
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DMR_41560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dma02000
]
DMR_41560
Transporters [BR:
dma02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
DMR_41560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
BAH77647
UniProt:
C4XPU7
LinkDB
All DBs
Position
complement(4696500..4697537)
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AA seq
345 aa
AA seq
DB search
MRFFCAAILCLAALPAMAENFNVGVLFWSMNIPGQVAMRHGLEAEAARINAQAKREGKPG
VVLTVQVAGDGETGIENQIRQMRELIGQQVDIIIVQPTDNAALSRPLKEANNVGIPVVAY
DQYISGGTLAAYRTSDNFQAGFLDGEYIASLVQPDREIRLVLVEYPHVSSTVERVNGFLD
ALRQSKRSYKVLKTYSAVEAVGGRKAAKEILKDFPAKGSIDVIFTVNDGGGLAVVEGLKA
AGRDEISVASVDGDPASVENIRVGRLTVIDSAQFCGPLGAAAMSAAYALLTGESTPYHAL
VPVFPVTRETLALYPGWLGPIPESYSKPWPSGTPTWSGSLKVVKP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagattcttctgcgctgccatcctgtgtctggctgctcttccggccatggcggaaaat
ttcaacgtgggcgtactcttctggtccatgaacatccccggccaggtggctatgcgacat
ggcttggaggccgaggcggcgcggatcaacgcgcaggctaagcgtgagggcaaacccggc
gtggtccttactgttcaggtcgccggagacggcgagacgggcattgagaaccagattcgt
cagatgcgcgaactcatcgggcagcaggttgacataatcattgtccagcccacggataac
gccgctctctccagaccgctcaaggaggccaacaacgtgggcattccggtggtggcctac
gaccagtacatcagcggagggaccctggccgcataccgtacttcggacaactttcaggct
ggatttctggacggggaatacatcgcctcccttgtgcagcccgaccgggaaatccggctg
gttctcgtggagtacccccacgtctcctcgaccgtggagcgggtcaacggtttcctggat
gccctgcgtcagtcgaagaggtcgtacaaggtgctcaagacatattcagctgtagaggct
gtgggagggcgcaaggctgcgaaagaaattctcaaggactttcctgctaaggggagtatc
gacgtcatttttaccgtcaacgacggtgggggccttgccgtggtggaaggactgaaggcg
gccggacgagacgaaatttcagtggccagcgtcgatggcgatcccgcttcggtggagaac
attcgtgtgggacggctgaccgtgattgactccgctcaattttgcgggccgctcggggcc
gcagccatgtcggctgcatacgccctgctcacaggtgaaagtaccccgtatcacgccctg
gtcccggtattccctgtcacgcgcgaaacgctcgctctctatccgggttggctcggcccc
atccctgaatcctattccaagccctggccgagtggcacgcccacctggagcgggtccctt
aaagtcgtgaagccttaa
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integrated database retrieval system
