Solidesulfovibrio magneticus: DMR_42530
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Entry
DMR_42530 CDS
T00917
Name
(GenBank) putative transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
dma
Solidesulfovibrio magneticus
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dma01011
]
DMR_42530
Enzymes [BR:
dma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DMR_42530
Peptidoglycan biosynthesis and degradation proteins [BR:
dma01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DMR_42530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_2
TPR_CcmH_CycH
TPR_1
TPR_6
Motif
Other DBs
NCBI-ProteinID:
BAH77744
UniProt:
C4XQ45
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All DBs
Position
4804528..4806834
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AA seq
768 aa
AA seq
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MKQPGIHPFSDRFGAVILALLLTLGLALSWGGSAQAAKPAGHAAKPVTQTAKARAAEPWS
PPPRPEDAPLPRSARLGGDEDGTPAGRTVKTPGGITESLREIALGVNEVLSGDHRQGAAR
LAAALPRAGDQADVAAYYQGLGLYLAGDAPAALAALDGLRARASQSFLGRDALYIAMESA
ARAGRPERTLALAEAWLADPEPSLAPAVWLRAAAAATNLGQRRKAEDFLRHLILDFPTSQ
SAKAGLALAEKLAATPDAAGGAAGFDPSAPDTVLLRAEALVEKGGAEAALALIPEAAPPG
WTPAQAARGGYVRGKALFRQRKPQAAYEAFAQAVAADPSASLAYWARYHQARCLWRSLKA
EDAERGVALLREVLAAPTRDDPLKEVAARHLALMLAERGRFAEASDAAGQLKGLAVPPDA
AAQGAALGAILRYVTGDMAGAEAELAAFAGRFPDDDWADGARYWRGKALANLGRGQEAAG
LWMEVAGGRPNTYYGGRAAAALASLGEVKGQVVASPPGKSPRCPDAAEPPSPAVSAALAK
AYALADAGLPALAEMALEFSAKAAPDRADLAMAHIRAAMDGGRRTAAMRTAWRTFGGCLL
RGTPAELMPLRDALYPRAYAGEVVTALNGSGIDPDVIYSLIRQESFFDPKAVSGAGAVGL
MQLMPETAKAVGKKIGIRPERADLFNPVVNIRLGVAFFRERLAREGSLAAALASYNAGEN
RVAVWNAGFGGLGEELFVELIPFTETRDYVRRITTNAMVYERLYLGKN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaccgggaatacacccgttctccgatcgatttggtgcggtcatcctcgctctg
ctcctgaccctggggctggccctgagctggggcggatcggcccaggccgccaagccggcc
ggccacgccgccaagcccgtcacccagacggccaaggcccgggcagctgaaccctggtcg
ccgccgccgcgccccgaggacgcaccgctgccgcgctcggcccgcctgggcggagacgag
gacgggacgccggccggacggacggtcaagacgccgggcggcatcaccgaatccctgcgc
gagatcgccctgggcgtgaacgaggtgctctccggcgaccatcgccagggcgcggcccgg
ctggcggccgccctgccccgggccggggatcaggccgacgtggccgcctattaccagggc
ctgggcctgtatctggccggcgacgccccggccgccctggccgccctggacggcctgcgc
gcccgggcctcgcagtcgtttctgggccgcgacgccctctacatcgccatggaaagcgcc
gcccgggccggccggcccgagcggaccctggccctggccgaggcctggctggccgacccc
gaaccgtccctggccccggccgtgtggctgcgggcggcggcggcggccacaaacctcggc
cagcggcgcaaggccgaggatttcctgcgccatctcatcctcgatttcccgacctcccag
tcggccaaggccgggctggccctggccgaaaaactcgccgccacgcccgatgcggccggc
ggcgcggccggcttcgatccgtccgcgccggacacggtgctcttgcgggccgaggccttg
gtggaaaaaggcggagccgaggccgccctggcgctaatccccgaggccgcgcccccgggc
tggaccccggcccaggccgcccggggcgggtacgtgcgcggcaaggcccttttccgccag
cgaaagccgcaagccgcctacgaggcctttgcccaggccgtggccgccgatccgtcggcc
tcactggcgtattgggcgcgctatcatcaggcgcgctgcctgtggcggtcactcaaggcc
gaagacgccgagcgcggcgtggcgctgttgcgcgaggtgctggccgcgcccacgcgcgac
gatcccctcaaagaggtcgccgcccgccatctggccctgatgctggccgagcgggggcgt
ttcgccgaggcttccgacgcggccggacagctcaaggggctggccgtgccgcccgacgcc
gccgcccagggcgcggcgctgggggccatcctgcgctacgtcacgggggacatggccggg
gccgaggcggagctggccgcctttgccggccgcttcccggacgacgactgggccgacggg
gcgcgctactggcgcggcaaggcgctggccaatctggggcgcggccaggaagcggccggg
ctgtggatggaggtggccggcggacggcccaatacctattacggcggccgggcggccgcc
gccctggccagccttggcgaggtcaaggggcaggtcgtggcctcgccgccgggcaagtcg
ccgcgttgcccggacgcggccgagccgccgtcgccggccgtgtccgccgccctggccaag
gcctatgccctggccgacgccggcttgccggccctggccgagatggcgctggaattttcg
gccaaggccgcgcccgaccgggccgatctggccatggcccacatccgggcggccatggac
ggcgggcgacgcacggccgccatgcgcacggcctggcgcacctttggcggctgtctgctg
cgcggcacgccggccgaactcatgccccttcgcgacgcgctctatcccagggcctacgcc
ggcgaggtggtgacggcgctaaacggctcgggcatcgacccggacgtgatctattcgctt
attcgccaggagagttttttcgatcccaaggccgtgtccggggccggggcggtggggctc
atgcagctcatgcccgagacggccaaggccgtgggcaaaaaaatcggcatccgtcccgag
cgggcggatttgttcaatccggtggtcaacatccgtctcggggtggcgtttttccgggag
cggctggcccgcgaggggtcgctggccgcggcgctggcatcctacaacgccggcgagaac
cgtgtggcggtctggaacgccggctttggcggcctgggcgaggagctgttcgtggagctg
attccttttacggagacccgggactatgtgcggcggatcacgacgaacgcgatggtgtat
gagaggctgtatttggggaagaattga
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