Dactylosporangium matsuzakiense: Dmats_00035
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Entry
Dmats_00035 CDS
T08700
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dmat
Dactylosporangium matsuzakiense
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmat03032
]
Dmats_00035 (gyrB)
03400 DNA repair and recombination proteins [BR:
dmat03400
]
Dmats_00035 (gyrB)
Enzymes [BR:
dmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dmats_00035 (gyrB)
DNA replication proteins [BR:
dmat03032
]
Prokaryotic type
DNA Topoisomerases
Dmats_00035 (gyrB)
DNA repair and recombination proteins [BR:
dmat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dmats_00035 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
UWZ45010
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All DBs
Position
7388..9331
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AA seq
647 aa
AA seq
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MAVNKPEQSYDSSSITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGFC
DTIEVTLLADGGVRVVDNGRGIPVDMHPKEKRPTVEVVLTVLHAGGKFDGQAYAVSGGLH
GVGISVVNALSTRIDLEIHKDDFVWRQRYNNSKPEPLQKGEPTDRTGTSVTFWPDPTIFE
TTTFVYEIIYRRIQEYAFLNRGLTIALRDERPDTPEEKREVVFCYENGIADFVRHLNATK
TPIHRTVVEFGSEGDGIAVEIAMQWNESYGESVYTFANTINTHEGGTHEEGFRSALTSVV
NKYGADKKFLKGDEKLTGEDIREGLAAIISVKLANPQFEGQTKTKLGNTEARSFVQKVCN
DRLVDWFDRNPAEVKTIITKASQAARARIAATQARKLARRKSLLESGSMPGKLADCQSND
PRLCEVFIVEGDSAGGSAKQGRDPRVQAILPIRGKILNVEKARIDRVLKNNEVQALITAL
GTGIHDEFDIEKLRYHKLILMADADVDGQHIQTLLLTLVFRFMRPLIELGHVYLAAPPLY
KIKWNKKGDDAQYAYTDRERDGLIELRQRSKPNAKPDDIQRFKGLGEMNYPELWETTMNP
ETRMLRQVTLDDAATADELFSVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtggcagtaaacaagcccgaacagtcctacgactcctcttcgatcaccgtcctcgagggg
ctcgaggcggtccgcaagcggcccggtatgtacatcggctccacgggcgagcgcggcctg
caccacctggtgtgggaggtcgtggacaacgcggtcgacgaggcgctggccggcttctgc
gacacgatcgaggtgaccctcctcgccgacggcggtgtgcgggtcgtggacaacggccgc
ggcatcccggtcgacatgcaccccaaagagaagcggcccaccgtcgaggtcgtcctgacc
gtcctgcacgccggcggcaagttcgacggccaggcgtatgcggtctccggtggtctgcac
ggcgtcggcatctcggtcgtcaacgcgctctcgacgcgcatcgacttggagatccacaag
gacgacttcgtctggcgccagcgctacaacaactcgaagcccgagccgctgcagaagggc
gagccgaccgaccggaccggcaccagcgtcaccttctggcccgacccgacgatcttcgag
acgacgacgttcgtctacgagatcatctaccggcgcatccaggagtacgccttcctcaac
cgcggcctcacgatcgcactgcgcgacgagcgcccggatacgccggaggagaagcgcgag
gtcgtcttctgctacgagaacggcatcgccgacttcgtgcggcacctcaacgcgacaaag
accccgatccaccgcaccgtcgtggagttcggctccgagggtgacggcatcgctgtcgag
atcgccatgcagtggaacgagtcgtacggcgagagcgtctacacgttcgccaatacgatc
aacacgcacgagggcggcacccacgaagaggggttccgcagcgcactgacgtcggtcgtg
aacaagtacggcgccgacaagaagttcctcaagggcgacgagaagctcaccggtgaggac
atccgcgagggcctcgccgcgatcatctcggtgaagctggccaacccgcagttcgagggc
cagaccaagaccaagctcggcaacaccgaggcacgcagcttcgtgcagaaggtgtgcaac
gaccggctggtggactggttcgaccgcaacccggccgaggtcaagaccatcatcaccaag
gcctcgcaggccgcccgggcccgcatcgccgccacgcaggcccgcaagctggcccgccgc
aagtcgctgctcgagtccggctcgatgccgggcaagctggccgactgccagtccaacgac
ccgcgcctgtgcgaggtgttcatcgtcgagggcgactcggccggcggctcggccaagcag
ggccgtgacccgcgggtccaggcgatcctgccgatccgcggcaagatcctcaacgtggag
aaggcgcgcatcgaccgcgtgctgaagaacaacgaggtgcaggcgctgatcaccgccctg
ggcaccggcatccacgacgagttcgacatcgagaagctgcgctaccacaagctcatcctg
atggccgacgccgacgtcgacggccagcacatccagaccctgctgctgacgcttgtcttc
cggttcatgcgccccctgatcgagctcgggcacgtgtatctcgcggcacccccgctgtac
aagatcaagtggaacaagaagggcgatgacgcgcagtacgcgtacaccgaccgtgagcga
gacggcctgatcgagctgcgccagcggtccaagcccaatgccaagccggacgacatccag
cgcttcaagggcctcggggagatgaactacccggagctctgggagaccacgatgaacccg
gagacccggatgctccgccaagtgaccttggacgacgctgcaaccgcggacgagctcttc
agcgtcctcatgggcgaagacgtagaagctcgccgctcgttcattcagcgcaacgccaag
gacgtccggttcctcgacatctga
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