Dactylosporangium matsuzakiense: Dmats_01900
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Entry
Dmats_01900 CDS
T08700
Name
(GenBank) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat00040
Pentose and glucuronate interconversions
dmat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dmats_01900
Enzymes [BR:
dmat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dmats_01900
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GFIT
Motif
Pfam:
Pectate_lyase
RicinB_lectin_2
Ricin_B_lectin
Motif
Other DBs
NCBI-ProteinID:
UWZ45333
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Position
421663..422922
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AA seq
419 aa
AA seq
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MQSSPTRRRVRIALAAASGVVAVAGVTLVATTSASAATVDTSATYVFVNRNSGKAIDVYN
WATNDGAPVDQWSRNDLAVQQWKFVDAGSGYYKIKSVMSGKVLDLPNSTDGLQLVQNADS
GSTTQHFRLQDSSGGYVRFVNRHSNKVIETWQWSTADGAMLDGYQNLDGANQQWQLVKLG
SGGGGTTPTAGGGSTPTGAWPTATGSASGAKTIKVSGTLDGGMKRYCCIGDGGQSESQDP
MFELADGATLKNVIIGSPAGDGVHCLGRCTIQNVWWEDVGEDGATFLGTNGGDSYVIGGG
ARSASDKLFQHNGNGTVHISNFYASGIGKLYRGCGNCTNHYERHVVVDNVLLVNAKYVVG
INTNWGDTATLTRVVVQSSSGIHICAEYTGVAKGSEPKYLGDGMGDGHCNFKSSDITYK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccagtcccacgcggcggcgggtgcgaatcgcgctggcggccgcgtccggtgtc
gtcgcggtggcgggggtgacgctcgtcgccacgacctcggcgtcggccgccaccgtcgac
acgagcgccacgtacgtcttcgtcaaccgcaacagcggcaaggccatcgacgtgtacaac
tgggcgacgaacgacggcgccccggtcgaccagtggtcgcgcaacgacctcgcggtgcag
cagtggaagttcgtcgacgccggctccgggtactacaagatcaagtcggtgatgagcggg
aaggtcctcgacctgcccaactcgaccgacggtctccagctcgtccagaacgccgacagc
ggctcgacgacgcagcacttccggctccaggactcgtcgggcgggtacgtccgcttcgtc
aaccgccacagcaacaaggtcatcgagacctggcagtggtcgaccgccgacggggcgatg
cttgacggataccagaacctcgacggcgccaaccagcagtggcagctcgtgaagctcggc
tccggcggcgggggcaccaccccgaccgcgggcggcggctccaccccgaccggcgcgtgg
ccgaccgccaccggctccgcgtccggtgccaagacgatcaaggtgagcggcacgctcgac
ggcggcatgaagcggtactgctgcatcggcgacggcggccagagcgagtcgcaggacccg
atgttcgagctggccgacggcgcgacgctgaagaacgtcatcatcggctcgcccgccggt
gacggcgtgcactgcctgggccgctgcaccatccagaacgtgtggtgggaggacgtgggc
gaggacggcgcgacgttcctgggcaccaacggcggtgactcgtacgtcatcggcggcggc
gcccggtccgccagcgacaagctgttccagcacaacggcaacgggactgtgcacatcagc
aacttctacgccagcggcatcggcaagctgtaccgcggctgcggcaactgcaccaaccac
tacgagcgtcacgtcgtcgtggacaacgtgctgctggtcaacgcgaagtacgtggtcggc
atcaacaccaactggggcgacaccgccacgcttacccgggtggtcgtgcagagctcgtcg
ggcatccacatctgcgccgagtacacgggcgtggcgaagggcagcgagccgaagtacctc
ggtgacggcatgggtgacggccactgcaacttcaagtcgtccgacatcacgtacaagtag
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