Dactylosporangium matsuzakiense: Dmats_01930
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Entry
Dmats_01930 CDS
T08700
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat00300
Lysine biosynthesis
dmat00470
D-Amino acid metabolism
dmat00550
Peptidoglycan biosynthesis
dmat01100
Metabolic pathways
dmat01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dmats_01930 (alr)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dmats_01930 (alr)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dmats_01930 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Dmats_01930 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dmat01011
]
Dmats_01930 (alr)
Enzymes [BR:
dmat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Dmats_01930 (alr)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Dmats_01930 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
dmat01011
]
Precursor biosynthesis
Amino acid ligase
Dmats_01930 (alr)
Racemase
Dmats_01930 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
AP_endonuc_2
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
UWZ45339
LinkDB
All DBs
Position
428128..430614
Genome browser
AA seq
828 aa
AA seq
DB search
MDPVSVAGVASIVGGKVHFQGEEREVGSVAIHSDRLQADSLFFALNGVTDGHRFVARALA
NGAIAAVVDEARLAELPAGQGTLIAVADPLAALQAMAVWWRRQLSSTTFVAVVGSNGKTL
TKDALVGLLAGHRTTYGSPGSYNSQLGVALSVLQCPKDVPVAVIEAAATEPGEMARLKRM
VDPHAVVFTNLGSRSGQNFGSRDEHARELLSMAAGLPEDGWLLMGEDDPEVLAQARQIVP
ERQIQKDALPRLTRQRHVERSSLVRAALPDGTEEDLLVATPSPEVLKDLELAMGAATLLG
MRGADLLAAVADYTPPSTRMQMWRRPDGATVVGELANIDPLALSSALRTARSLMGAQGRT
LMIIGDPLAGLTAETAEAMARCLRAENVQLVCGLSADTHGLIEAALAGSDVRVHRFADED
RMRAFVATELRPDDVALVHVPRDTMVTDSWMHLVETAAATRLYVDLAAVKDNVAAFRKLV
GPHTKLMGVVKAEAYGTNPVTVAHTLREAGVDWLGVATADEGVALRRAGVQMPILVFLAV
PGDLDRLVRNRLTPSLYSMEMYDAACRAAAASGRRLDVHVEVDSGMHRSGLYPEAAIELL
GKLRGHEHLRLAGLMSHLGCPDDPDEDDLTREQLKRFGSVCAAAAELGFEDVVRHTAATA
ATIRFPEARYDMVRIGLGLYGLQPSTATSSLITLTPGVGLVSRIVEIHNMVPGERVGYGG
LFRAQSPDTRIALIAAGYYDAVPRAFRKVGYVLVNGRRCEIAGTISMDSMAIDITGHPDA
EVGSDVLIFGQYAGFSTPIEQAAAAMDTVSHEVLTQVGPRVQRIFTQH
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggacccagtctcggtcgccggggtggcgtcgattgtcggcggtaaggtgcacttccag
ggcgaagagcgcgaagtcggcagcgtcgcgattcactcggaccggttacaggcggacagt
ctgttctttgcgctcaatggggttactgacggtcaccggttcgtggcgcgggcgctcgcg
aacggggccattgcggcggttgtggacgaggcgcgcctggccgagctgcccgcggggcag
gggacgctcatcgccgtcgccgatccgctcgcggcgctgcaggcgatggcggtctggtgg
cggcggcagctcagctcgacgacgttcgtggcggtcgtgggcagcaacggcaagacgctt
accaaggatgcgctggtcgggctgctcgccgggcaccgcaccacgtacggcagcccgggc
agctacaacagccagctcggcgtcgcgctctcggtgttgcagtgcccgaaggacgtgccg
gtggccgtgatcgaggcggccgcgaccgagcccggggagatggcccggctcaagcggatg
gtcgacccgcacgccgtcgtgttcaccaacctcggctcgcgcagcgggcagaacttcggc
agtcgcgacgagcacgcccgtgagctgctcagcatggcggccggcctgcccgaagacggg
tggctgctgatgggcgaggacgatccggaggtactcgcccaggcccggcagatcgtgccg
gagcgccagatccagaaggacgcgctgccccgcctgacccggcagcgccacgtcgagcgg
tcgtcgctggtgcgggccgcgctgcccgacggcaccgaggaggacctcctggtggcgacg
ccgtcaccggaggtactcaaggatctggagctggcgatgggtgcggcgaccctgctcggc
atgcggggcgccgacctgctggccgcggtggccgactacacgccgccgtcgacgcggatg
cagatgtggcggcggcccgacggcgcgacagtcgtcggcgagctggccaacatcgacccg
ctggcgctgagcagtgcgctgcggacggcccgctcgctcatgggcgctcagggccgcacg
ctgatgatcatcggtgatccactggccgggctgaccgccgagaccgccgaggcgatggcc
cgctgcctgcgcgccgagaacgtccagctggtctgcggcctgtcggccgacacgcacggc
ctgatcgaggccgcgctggccggcagcgacgtgcgggtgcaccggttcgccgacgaggac
cgcatgcgcgcgttcgtggccaccgagctgcgcccggacgacgtggcgctcgtgcacgtc
ccgcgggacacgatggtcaccgactcgtggatgcacctggtggagacggccgccgcgacc
cggctctacgtggacctggccgcggtcaaggacaacgtcgccgcgttccgcaagctcgtc
ggcccgcacacgaagctgatgggcgtcgtgaaggcggaggcctacggcaccaaccccgtg
acagtcgcgcacaccctgcgcgaggcgggcgtggactggctcggcgtggcgaccgctgac
gagggggtggcgctgcggcgggctggagtacagatgccgattctggtgtttctggcggtt
ccgggggatctcgatcggctcgtccgcaaccggttgacgccgtcgctgtactccatggag
atgtacgacgccgcctgccgggccgcggctgcgagcgggcggcggctcgacgtgcacgtc
gaggtcgactcggggatgcaccgcagcgggctgtatccggaggccgcgatcgagctgctc
gggaagctgcgcggccacgagcacctgcggctggccggcctgatgagccacctgggctgc
cccgacgacccggacgaggacgacctgacccgcgagcagctcaagcgcttcggctcggtg
tgcgcggccgccgccgagctgggcttcgaggatgtcgtgcggcacaccgccgcgacggcc
gccacgatccgcttcccggaggcccgctacgacatggtccgcatcggcctgggcctctac
gggctccagccgtcgaccgcgaccagcagcctcatcacgctgacaccgggcgtgggcctg
gtgtcacggattgtcgagatccacaacatggtcccgggtgagcgggtcggctacggcggc
ctgttccgcgcgcagtcaccggacactcgcatcgcgcttatcgcggccggctactacgac
gccgtcccgcgcgcgttccgcaaggtcgggtacgtcctggtgaacggccgccgctgcgag
atcgccggcaccatctccatggactcgatggcgatcgacatcaccggccacccggacgcg
gaggtcggctccgacgtgctcatcttcgggcagtacgccggcttctccaccccgatcgag
caggccgccgcggcgatggacaccgtgtcacacgaggtcctgacgcaggtcggcccgcgc
gttcagcggatcttcacccagcactag
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