Dactylosporangium matsuzakiense: Dmats_02180
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Entry
Dmats_02180 CDS
T08700
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
dmat
Dactylosporangium matsuzakiense
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmat03021
]
Dmats_02180
Transcription machinery [BR:
dmat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dmats_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_Tnp_4
MarR
HTH_10
HTH_3
HTH_23
MarR_2
HTH_37
DUF7343
Sigma70_ECF
HTH_24
HTH_31
NirdL-like_HTH
HTH_AraC
IF2_N
HTH_19
GerE
Motif
Other DBs
NCBI-ProteinID:
UWZ45379
LinkDB
All DBs
Position
complement(480557..481411)
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AA seq
284 aa
AA seq
DB search
MTTISVDRAIDRALADAAPASSGTSESTSTRATDAQARALLSLMADLPAGADRARVRARL
IELYIPLAEYLARRFRNRGEHFDDLVQVANLGLIKSVDGYDPSRGAAFTSYAIPMIVGEL
KRHFRDKGWDVRVPRRLQELRLEISKVSGDLAQDLGRSPTVADLATRLGVSEEEVIEGLD
CGQAYRALSLDAPAGEGSDPGAAGLGDLLGDVDPDMQNVENREALRPLLAKLPEREQKII
AMRFHGNLTQSQIASELGISQMHVSRLLAAALRTLRSELSAVAE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatctctgtcgaccgcgccatcgaccgcgccctcgccgacgccgccccggcc
agctccgggacgagcgaaagcaccagcacccgggcgaccgacgcacaggcccgcgcgctg
ctgtcgctgatggccgacctccccgcgggcgccgaccgcgcccgtgtccgcgcccggctc
atcgagctgtacatcccgctcgcggagtacctggcccggcgcttccgcaaccgcggcgag
cacttcgacgacctcgtacaggtcgccaacctcgggctcatcaagtccgtcgacggctac
gacccgtcccgcggggccgcgttcaccagctacgccatcccgatgatcgtcggcgagctc
aagcggcacttccgcgacaagggctgggacgtccgcgtcccgcggcggctgcaggagctg
cgtctggagatctccaaggtctccggcgatctggcccaggacctgggccgctcccccacg
gtcgccgacctcgccacgcgcctcggcgtcagcgaggaagaggtgatcgagggtctggac
tgcgggcaggcgtaccgtgcgctctccctcgacgccccggcgggcgagggcagcgacccg
ggcgcggccggcctcggcgacctgctcggtgacgtggacccggacatgcagaacgtggag
aaccgcgaggcgctccgcccgctgctggccaagctcccggagcgcgagcagaagatcatc
gcgatgcgcttccacggcaacctgacccagtcccagatcgcgtccgagctcggcatctcc
cagatgcacgtgtcccggctgctggccgccgcgctgcgcaccctgcgctcggagctcagc
gctgtcgcggagtag
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