Dactylosporangium matsuzakiense: Dmats_08690
Help
Entry
Dmats_08690 CDS
T08700
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dmats_08690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmat03021
]
Dmats_08690
Transcription machinery [BR:
dmat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dmats_08690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_20
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
UWZ46484
LinkDB
All DBs
Position
complement(1996481..1998157)
Genome browser
AA seq
558 aa
AA seq
DB search
MTAAHQPSVDVRSLADTLIARAASNGGHLTSAEVAQAVDTADVTPAHAKKLLRSLAEAGV
TVVVDDSAHSRRRVAAARSATPASKAATAKAAPPARKAPAAKPLTAVESVPDPAAAKKVP
VKKAAPTAPTASAAAAAAPAAGAPAAAAAKKAAPAKKAAAKKAGPVKAAPDGAKKAPADP
ANPGVPGEEPELEEIDDAALAAEIEDVVVDEPVEATQAAEADAEATATDDDFAWDDDESE
ALKQARRDAELTASADSVRAYLKQIGKVPLLNAEQEVELAKRIEAGLYAAERLRAAEDAG
EPMQMPGRRDFLWISRDGERAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIR
AVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDL
GREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDA
VSFSLLQDQLQQVLQTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKT
MSKLRHPSRSQVLRDYLD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagctcaccagcccagcgttgacgtacgttccctcgccgacacgctgattgcg
cgtgccgcctccaatggcgggcacctgacgtcggcggaggtcgcccaggcggtcgacacg
gcagacgtaactcccgcgcacgccaagaagctgctgaggagcctggccgaggcgggcgtc
accgtcgtggtcgacgactccgctcacagccggcgccgggtcgcagcggctcgatcggcg
acccccgcatccaaggcggccaccgcgaaggccgcgccaccggcccgcaaggctcccgcg
gccaagccgctgacagccgtcgagtccgtcccggacccggcggcggcgaagaaggtcccc
gtgaagaaggccgcgcctacggcgcccaccgcatccgccgcggctgccgcggcacccgct
gccggggctccggccgcggccgcggcgaagaaggccgcgccggccaagaaggcggcggcg
aagaaggccggaccggtcaaggcggcaccggacggcgccaagaaggcaccggccgacccc
gccaacccgggcgtgcccggcgaggagccggagctcgaggagatcgacgacgccgccctg
gccgccgagatcgaggacgtcgtcgtcgacgagccggtcgaggcgacccaggcggccgag
gccgacgcggaggccacggccaccgacgacgacttcgcgtgggacgacgacgagtccgag
gccctcaagcaggcccggcgcgacgctgagctcaccgcctcggccgactcggtgcgggcc
tacctcaagcagatcggcaaggtcccgctgctcaacgccgagcaggaggtggagctggcc
aagcggatcgaggccgggctctacgcggccgagcgcctgcgcgcggccgaggacgccggc
gagccgatgcagatgcccggccgccgcgacttcctgtggatctcgcgcgacggcgagcgg
gccaagaaccacctgctcgaggccaacctccggctcgtcgtgtcgctggccaagcggtac
acgggccgtggcatggcgttcctggacctcatccaggagggcaacctgggcctcatccgc
gcggtcgagaagttcgactacaccaagggctacaagttctccacctacgccacctggtgg
atccgccaggccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtg
cacatggtcgaggtcatcaacaagctcgggcgcatccagcgcgagctgctccaggacctg
ggccgcgagcccaccccggaggagctggccaaggagatggacatcacgccggagaaggtg
ctggagatccagcagtacgcccgggagcccatctccctcgaccagaccatcggcgacgag
ggcgacagccagctgggcgacttcatcgaggactccgaggcggtcgtggccgtcgacgcg
gtctcgttctcgctcctgcaggaccagctccagcaggtcctgcagacgctctcggagcgc
gaggcgggcgtcgtgcggctccgtttcggcctcaccgacggccagccgcggacccttgac
gagatcgggcaggtgtacggggtgacccgtgagcgcatccgccagatcgagtccaagacg
atgtcgaagctgcgccacccgtcgcgttcgcaggtgctgcgcgactacctcgactga
DBGET
integrated database retrieval system