KEGG   Dactylosporangium matsuzakiense: Dmats_08690
Entry
Dmats_08690       CDS       T08700                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
dmat  Dactylosporangium matsuzakiense
Pathway
dmat02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:dmat00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Dmats_08690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmat03021]
    Dmats_08690
Transcription machinery [BR:dmat03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Dmats_08690
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 HTH_20 Dimerisation
Other DBs
NCBI-ProteinID: UWZ46484
LinkDB
Position
complement(1996481..1998157)
AA seq 558 aa
MTAAHQPSVDVRSLADTLIARAASNGGHLTSAEVAQAVDTADVTPAHAKKLLRSLAEAGV
TVVVDDSAHSRRRVAAARSATPASKAATAKAAPPARKAPAAKPLTAVESVPDPAAAKKVP
VKKAAPTAPTASAAAAAAPAAGAPAAAAAKKAAPAKKAAAKKAGPVKAAPDGAKKAPADP
ANPGVPGEEPELEEIDDAALAAEIEDVVVDEPVEATQAAEADAEATATDDDFAWDDDESE
ALKQARRDAELTASADSVRAYLKQIGKVPLLNAEQEVELAKRIEAGLYAAERLRAAEDAG
EPMQMPGRRDFLWISRDGERAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIR
AVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDL
GREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDA
VSFSLLQDQLQQVLQTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKT
MSKLRHPSRSQVLRDYLD
NT seq 1677 nt   +upstreamnt  +downstreamnt
gtgacagcagctcaccagcccagcgttgacgtacgttccctcgccgacacgctgattgcg
cgtgccgcctccaatggcgggcacctgacgtcggcggaggtcgcccaggcggtcgacacg
gcagacgtaactcccgcgcacgccaagaagctgctgaggagcctggccgaggcgggcgtc
accgtcgtggtcgacgactccgctcacagccggcgccgggtcgcagcggctcgatcggcg
acccccgcatccaaggcggccaccgcgaaggccgcgccaccggcccgcaaggctcccgcg
gccaagccgctgacagccgtcgagtccgtcccggacccggcggcggcgaagaaggtcccc
gtgaagaaggccgcgcctacggcgcccaccgcatccgccgcggctgccgcggcacccgct
gccggggctccggccgcggccgcggcgaagaaggccgcgccggccaagaaggcggcggcg
aagaaggccggaccggtcaaggcggcaccggacggcgccaagaaggcaccggccgacccc
gccaacccgggcgtgcccggcgaggagccggagctcgaggagatcgacgacgccgccctg
gccgccgagatcgaggacgtcgtcgtcgacgagccggtcgaggcgacccaggcggccgag
gccgacgcggaggccacggccaccgacgacgacttcgcgtgggacgacgacgagtccgag
gccctcaagcaggcccggcgcgacgctgagctcaccgcctcggccgactcggtgcgggcc
tacctcaagcagatcggcaaggtcccgctgctcaacgccgagcaggaggtggagctggcc
aagcggatcgaggccgggctctacgcggccgagcgcctgcgcgcggccgaggacgccggc
gagccgatgcagatgcccggccgccgcgacttcctgtggatctcgcgcgacggcgagcgg
gccaagaaccacctgctcgaggccaacctccggctcgtcgtgtcgctggccaagcggtac
acgggccgtggcatggcgttcctggacctcatccaggagggcaacctgggcctcatccgc
gcggtcgagaagttcgactacaccaagggctacaagttctccacctacgccacctggtgg
atccgccaggccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtg
cacatggtcgaggtcatcaacaagctcgggcgcatccagcgcgagctgctccaggacctg
ggccgcgagcccaccccggaggagctggccaaggagatggacatcacgccggagaaggtg
ctggagatccagcagtacgcccgggagcccatctccctcgaccagaccatcggcgacgag
ggcgacagccagctgggcgacttcatcgaggactccgaggcggtcgtggccgtcgacgcg
gtctcgttctcgctcctgcaggaccagctccagcaggtcctgcagacgctctcggagcgc
gaggcgggcgtcgtgcggctccgtttcggcctcaccgacggccagccgcggacccttgac
gagatcgggcaggtgtacggggtgacccgtgagcgcatccgccagatcgagtccaagacg
atgtcgaagctgcgccacccgtcgcgttcgcaggtgctgcgcgactacctcgactga

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