Dactylosporangium vinaceum NRRL B-16293: Dmats_11240
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Entry
Dmats_11240 CDS
T08700
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dmat
Dactylosporangium vinaceum NRRL B-16293
Pathway
dmat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dmats_11240 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmat03400
]
Dmats_11240 (xth)
Enzymes [BR:
dmat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Dmats_11240 (xth)
DNA repair and recombination proteins [BR:
dmat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Dmats_11240 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
TPR_ELP1
Motif
Other DBs
NCBI-ProteinID:
UWZ46925
LinkDB
All DBs
Position
complement(2563298..2564113)
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AA seq
271 aa
AA seq
DB search
MRLATWNVNSVKARLPRLLEWLEQSAPDVLCLQETKLATDAFPAEEVKALGYDTAHHGEG
RWNGVALLSRVGLDDVRRGFAGDPGWGGEPGGEEPLFEEPKLEARAVSAVCGGVRVWSVY
VPNGRAPESAHYGYKLNWLEALRVAVSQDLATGEPVAVCGDFNVAPADSDVFDPAAFIGS
THVTKPERDAVAALVAAGLSDIVPKPMKGPNPFTYWDYRAGMFHQDKGMRIDLALVSAAV
AGAVKGAYIDREARKGKGPSDHAPVVIDFDI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcttgctacctggaacgtgaactcggtcaaggcccggctgccccggctcctggag
tggctggagcagtcggcgcccgacgtgctgtgcctgcaggagacgaagctggccaccgac
gccttccccgcggaggaggtcaaggcgctcggctacgacactgcacaccacggggaaggg
cgctggaacggcgtcgcgctgctgtcgcgggtggggctcgacgacgtgcgccggggcttc
gcgggcgacccgggctggggcggtgagcccggtggcgaggagccgctcttcgaggagccg
aagctggaggcccgggccgtctcggccgtctgcggtggcgtgcgggtgtggtcggtctac
gtccccaacgggcgggcgccggagtcggcgcattacgggtacaaactcaattggctcgag
gctcttcgtgtggcggtctcgcaggatctggccaccggggagccggtcgccgtgtgcggc
gacttcaacgtggcgccggcggactccgacgtgttcgacccggccgcgttcatcggctcg
acgcacgtgacgaagccggagcgcgacgcggtcgccgccctggtcgcggcggggctgtcg
gacatcgtcccgaaaccgatgaaaggcccgaatccgttcacctattgggactatcgggcc
ggtatgttccaccaggacaagggcatgcggatcgacctggccttggtcagcgcggcagtc
gcgggtgcggtcaagggtgcctatatagaccgcgaggccaggaagggcaaagggccctcc
gaccacgcgcccgtcgtgatcgatttcgatatttga
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