Dactylosporangium matsuzakiense: Dmats_22120
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Entry
Dmats_22120 CDS
T08700
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat00040
Pentose and glucuronate interconversions
dmat01100
Metabolic pathways
dmat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dmats_22120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dmats_22120
Enzymes [BR:
dmat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dmats_22120
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
UWZ48858
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Position
4826974..4828281
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AA seq
435 aa
AA seq
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MHEGIRAGLTAATVAGLVAAGVALAGTASAGSVAVPAAARQTLAANDGWGSAGASTTGGS
AADDAHVFVVRTRDQLAAAVAGGTPKIVLIAGTIDANEGRTCADYADPAYDLQAYLTTYD
PATWGRVAPSGPLENARVQSAKNQGLKVKIEVGANTTVYGLRNARIKGGNLLVTNQSNVI
IRNVAFEDAYDCFPVWSPTDGAEGNWNSLYDSVTLSGATNVWLDHNSFTDGANQDVDQPI
YFGRPYQVHDGAADMIRGTDLVTFSYNNLFEHDKTMLIGSTNTPGVDVGKLRITLHHNRF
ADLGQRVPRVRFGQVDVYNNYYYATDEDTFVYAIGVGVQSQVYAENNFVLRSADTPLNAF
VYNWGGTQMTEKGTLARVGTGPIVAVNLLDEYNAAFDPDIATDAGWTPVLRAGLDPTANV
PALVTANAGTGKLPG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaggaatccgcgccggcctcaccgccgccacggtggccgggctggtcgcggcc
ggcgtcgcgttagccggcacggccagtgccggctcggtggcggtgccggccgcggcgcgc
cagacccttgccgcgaacgacggctggggctcggcgggcgccagcaccaccggcggctcg
gcggccgacgacgcgcacgtgttcgtggtgcgcacccgcgaccagctggccgcggccgtc
gccggcggcacgccgaagatcgtgctgatcgccggcacgatcgacgccaacgagggacgc
acctgcgccgactacgcggaccccgcgtacgacctgcaggcgtacctgacgacgtacgac
ccggcgacgtgggggagggtggccccgagcgggccgctggagaacgcccgcgtgcagtcg
gcgaagaaccagggcttgaaggtcaagatcgaggtcggggcgaacacgactgtctacggg
ctgcgcaacgcccgcatcaagggtggcaacctgctggtcacgaaccagagcaacgtgatc
atccggaacgtcgcgttcgaggacgcgtacgactgcttcccggtgtggtcgccgacggac
ggtgccgagggcaactggaactcgctctacgacagcgtcacgctcagcggcgcgacgaac
gtctggctcgaccacaactcgttcaccgacggcgccaaccaggacgtcgaccagccgatc
tacttcggccggccgtaccaggtgcacgacggcgccgccgacatgatccgcggcaccgac
ctcgtcacgttctcgtacaacaacctgttcgagcacgacaagacgatgctcatcggctcc
acgaacacgcccggtgtggacgtgggcaagctgcgcatcacgctgcaccacaaccgcttc
gccgacctgggccagcgcgtgccgcgggtccgcttcggtcaggtggacgtgtacaacaac
tactactacgcgaccgacgaggacacgttcgtctacgcgatcggcgtcggcgtgcagtcg
caggtgtacgcggagaacaacttcgtcctgcgcagcgccgacaccccgctcaacgcgttc
gtctacaactggggcggcacgcagatgacggagaagggcaccctggcccgggtcggcacc
ggccccatcgtcgcggtgaacctgctcgacgagtacaacgcggcgttcgacccggacatc
gcgaccgacgccggctggaccccggtcctgcgcgccggcctcgacccgacggcgaacgtg
ccggccctggtcacggccaacgcgggcaccgggaagctgcccggctga
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