Dactylosporangium matsuzakiense: Dmats_33670
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Entry
Dmats_33670 CDS
T08700
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat00040
Pentose and glucuronate interconversions
dmat01100
Metabolic pathways
dmat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dmats_33670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dmats_33670
Enzymes [BR:
dmat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dmats_33670
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
F5_F8_type_C
DUF7402
Motif
Other DBs
NCBI-ProteinID:
UWZ42488
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Position
complement(7382038..7383603)
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AA seq
521 aa
AA seq
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MRRAVAWRLLPVLTAGAVGAGFVALQAMPEAAAATGGVTGYATQNGGTTGGAGGAVVKAT
TGTAIHQALCGRASDTTPITIQVEGTITVGNTAKVSGSCNTAAGVIELKQISNVTIIGVG
GGAIFDQIGIHIREAKNIIIQNVTVRNVKKSGSPTSNGGDAIGMESGVSNVWVDHNTLYA
SGGEDEGYDSLIDMKAGTKYVTVSYNTLRNSGRGGLIGSSDSDTGNGPVTFHHNIYENID
SRTPLLRAATAHIYNNYYLGLTKSGINPRDGGKAKVDNNYFKNSADVLGTFYTDLMGSWQ
VSGNIFDNVTWSAPGTENHPAGPNVTSTTTISVPYSYSLDPAGCVPSVLASTAGAGKGLQ
VSNGSCTPTSPTAGPTTSSPRPTSASPTPSRTAGPTPTQGGGPNLSIGAGADGSSKGSGT
SYGNVIDGNLSTYWSPSGTTGSISVKWSAATSISRITIREASGAAGRIGSYRVLNADTGA
VLASGSGAGTVSFTKTSLKKVTFEITGASGTPQIAEFETYA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgagcagtcgcatggcggcttctgccggtgctgaccgcgggcgcggtcggtgcc
gggttcgtcgcgttgcaggcgatgcccgaggcggccgccgcgaccggcggggtcacgggc
tacgccacgcagaacggcggcaccacgggcggggccggcggggcggtggtgaaggcgacc
accggtaccgccatccaccaggccctgtgcggccgggccagcgacaccaccccgatcacg
atccaggtcgagggcaccatcaccgtcgggaacaccgccaaggtctccggcagctgcaac
accgcggccggcgtgatcgagctcaagcagatcagcaacgtcacgatcatcggcgtgggc
ggcggtgcgatcttcgaccagatcggcatccacatccgcgaggccaagaacatcatcatc
cagaacgtgacggtccgcaacgtcaagaagtcgggctcgcccacgtccaacggcggcgac
gcgatcggcatggagagcggcgtcagcaacgtgtgggtcgaccacaacacgctgtacgcg
tccggcggcgaggacgagggctacgactcgctcatcgacatgaaggccggcaccaagtac
gtcaccgtctcctacaacaccctgcgcaactccggccgcggcggcctcatcggctccagc
gacagcgacacgggcaacggcccggtcacgttccaccacaacatctacgagaacatcgac
tcccgcacgccgctgctgcgcgcggccacggcccacatctacaacaactactacctgggc
ctgaccaagtccgggatcaacccgcgcgacggcggcaaggccaaggtcgacaacaactac
ttcaagaactccgccgacgtcctcggcacgttctacaccgacctgatgggctcctggcag
gtcagcggcaacatcttcgacaacgtgacctggagcgcccccggcaccgagaaccacccg
gccggccccaacgtcacgtcgaccaccaccatcagcgtcccctactcctactcgctcgac
ccggccggctgcgtgccgagcgtgctggccagtacggccggcgccggcaagggcctgcag
gtgtcgaacggcagctgcaccccgaccagcccgaccgccggcccgaccacctcctcgccc
cggccgacgagcgcaagcccgaccccgagccggacggccggcccgaccccgacgcagggc
ggcggcccgaacctgagcatcggcgccggcgcggacggctccagcaagggcagcggcacc
agctacggcaacgtgatcgacggcaacctgagcacgtactggtcgcccagcggcaccacc
ggctccatctccgtcaagtggagcgccgccacctcgatctcccggatcaccatccgcgag
gcgtccggcgcggcgggccgcatcggcagctaccgcgtcctcaacgccgacaccggcgcg
gtcctggcctccggctccggcgcgggcaccgtctccttcacgaagacgtcgctgaagaag
gtgaccttcgagatcaccggcgcgagcggcaccccgcagatcgccgagttcgagacctac
gcctga
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