Dactylosporangium matsuzakiense: Dmats_36420
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Entry
Dmats_36420 CDS
T08700
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmats_36420 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmat03019
]
Dmats_36420 (recQ)
03400 DNA repair and recombination proteins [BR:
dmat03400
]
Dmats_36420 (recQ)
Enzymes [BR:
dmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dmats_36420 (recQ)
Messenger RNA biogenesis [BR:
dmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dmats_36420 (recQ)
DNA repair and recombination proteins [BR:
dmat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dmats_36420 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
UWZ42958
LinkDB
All DBs
Position
7992729..7994552
Genome browser
AA seq
607 aa
AA seq
DB search
MENALDVLRRVFGYDEFRGSQQDIIEHVINGGDALVLMPTGGGKSLCYQIPAIVRPGTAV
VISPLIALMQNQVDALREVGVKAGFINSTLDYDMRRTVEAQFVGGELDLLYLAPEALASQ
GTMRLLERGKIGLFAIDEAHCVSQWGHDFRPDYLNLSMLHERWPDVPRIALTATATSATH
KEIATRLGLDGARHFVSSFDRPNIQYRIVGKQEPRRQLLDFLRGEHRNEAGIVYCLSRNS
VEKIAEFLKANGIPALPYHAGLDARTRATNQDRFLKEDGLVMVATIAFGMGIDKPDVRFV
AHLDLPKSIEGYYQETGRAGRDGEPSVAWLAYGLQDVVQQRKMIETSEGDAAHRRNLGQH
LDAMLALCETVRCRRAQLLAYFGQDLGKPCDNCDTCLAPPESWDGTVAAQKLLSTVYRLE
RERNQKFGAGQCIDILLGKKTDKVVQWHHDELSVFGVGADLRDTEWRAVIRQLLAQGLLS
VEGDYGTLVLTDASSEVLGRRRTVMLRREPDRPVSTAKAAKTARAEAAATMPAEAAPVFE
HLRAWRAATAKEQSVPAYVIFHDATLRQIAAERPRTLSQLSSISGVGESKLAKFGQPILD
ALAELDA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcactcgatgtgttgcgcagggtgttcggctacgacgagttccgcggcagc
cagcaggacatcatcgagcacgtgatcaacggcggcgacgccctggtgctcatgccgacc
ggcggcggcaagtcgctgtgttaccagatcccggcgatcgtccggcccggcacggcggtg
gtcatctccccgctcatcgccctcatgcagaaccaggtcgacgcgctgcgcgaggtcggc
gtcaaggccgggttcatcaactccacgctcgactacgacatgcggcgcaccgtcgaggcc
cagttcgtcggcggcgagctcgacctgctctacctggcgccggaggccctcgcgtcccag
ggcacgatgcgcctgctggagcggggcaagatcggcctgttcgcgatcgacgaggcgcac
tgcgtctcccagtgggggcacgacttccggcccgactacctcaacctgtcgatgctgcac
gagcgctggcccgacgtgccgcggatcgcgctgacggcgaccgccacgagcgcgacgcac
aaggagatcgcgacccgcctggggctcgacggcgcgcgccacttcgtctcgagcttcgac
cggccgaacatccagtaccggatcgtcggcaagcaggagccgcgccgccagctcctcgac
ttcctgcgcggcgagcaccgcaacgaggccggcatcgtctactgcctgtcccgcaactcg
gtcgagaagatcgccgagttcctcaaggccaacggcatcccggccctgccctaccacgcc
ggcctcgacgcgcgaacccgcgcgacaaaccaggaccgcttcctcaaggaggacggcctg
gtcatggtggccacgatcgcgttcggcatgggcatcgacaagcccgacgtccgcttcgtg
gcccacctcgacctgccgaaatccatcgagggctactaccaggagaccggccgcgcgggc
cgcgacggcgagccctcggtcgcgtggctggcctacgggctgcaggacgtcgtccagcag
cgcaagatgatcgagacctccgagggcgacgccgcccaccgccgcaacctcggccagcac
ctcgacgccatgctcgccctgtgcgaaaccgtcaggtgccgccgcgcccagctcctcgcc
tacttcggccaggatctcggcaagccctgcgacaactgcgacacctgcctggcacccccg
gagtcctgggacggcaccgtcgccgcccagaaactgctctcgaccgtgtaccgcctggag
cgcgaacgcaaccagaagttcggcgcgggccagtgcatcgacatcctgctcggcaagaag
accgacaaggtcgtccagtggcaccatgacgagctgtcagtcttcggcgtcggcgcggac
ctccgcgacaccgagtggcgcgccgtcatccgccagctcctggcccagggcctgctctcc
gtcgaaggcgactacggcaccctggtcctgaccgacgccagcagcgaggtcctcggccgc
cgccgcaccgtcatgctccgccgcgaaccggaccgccccgtctccaccgcgaaggccgcc
aagaccgcccgcgccgaggccgccgccaccatgcccgccgaagccgccccggtcttcgaa
cacctccgagcctggcgcgccgccacggccaaggaacagtccgttccggcctacgtcatc
ttccacgacgccaccctccgccagatcgccgccgaacgcccccgcacgctgagccagctc
tcctcgatcagcggggtgggcgagagcaaactggccaagttcggccagccgattctggac
gccctggccgaactcgacgcctga
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