Dactylosporangium matsuzakiense: Dmats_38640
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Entry
Dmats_38640 CDS
T08700
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat03030
DNA replication
dmat03430
Mismatch repair
dmat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dmats_38640 (dnaE)
03430 Mismatch repair
Dmats_38640 (dnaE)
03440 Homologous recombination
Dmats_38640 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmat03032
]
Dmats_38640 (dnaE)
03400 DNA repair and recombination proteins [BR:
dmat03400
]
Dmats_38640 (dnaE)
Enzymes [BR:
dmat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dmats_38640 (dnaE)
DNA replication proteins [BR:
dmat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dmats_38640 (dnaE)
DNA repair and recombination proteins [BR:
dmat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dmats_38640 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UWZ43342
LinkDB
All DBs
Position
complement(8457684..8461193)
Genome browser
AA seq
1169 aa
AA seq
DB search
MPSSVADNPVPWCSRLHDRWTYDAVRGTARAGGKRPRNLDFLSYPPSSVAAVGFVHLHVH
TEYSMLDGAARLGPLFAEAARLGQPALAMTDHGNMFGAHDFYHQAIRAGIKPIIGVEAYL
TPGTHRGDRTRVRWADGGENDVSGGGAYTHLTLLAADATGLRNLFRLTSRASTEGYFYKP
RADRELLAEYAPGLIATTGCPSGEVQTWLRIGDFERACRAAGELLDIFGPGNLYLELMDH
GLQIETRVRADLLRLGRRLGLAPIATNDLHYTFAGDADAHEALLAVQSATTLADPKRFKF
DARDFYLKSAAEMRRIWDAEVPGACDNTLAVAERIGDYADVFAHRSLMPTFPVPPGTTED
AVLRAEVERGLARRFPHGVSEAHANQAAYELSVILGADLAGYFLVVADLVAHAHAQGIRV
GPGRGSAAGSLVAYALGITELDPLAHGLLFERFLNPERPSMPDIDMDFDERRRGEMIRYA
TEQYGEDRVSQIITYGTIKAKAAIKDAARVLGFPFSLGERISKAVPPPVLGRDMPLSGVF
DPAHPRFKEGGELRRLYESEPEVRTVVDTARGLEGLKRQWGVHAAGVILSREPLIDVLPI
QKREQDGAIITQWDMGACEDMGLLKMDFLGLRNLTIIDDALDAIRDNRRREVVIEDAPLD
DAPTYALLSRGDTLGVFQFEATPVRHLLRSMAPDSFADVSAVGALYRPGPIAANAHNEYA
DRKNGRRPVTPIHPELAEPLADILGDTYGLIVYQEQVMAIAQRVAGYTLGAADRLRRAMG
KKKKEILDQEFTDFAPAMRERGYSEGAIRTLWDILVPFSDYAFNKAHSVAYGLVAYWTAY
LKANFPAEYMAALLTSIGGDKDRSAVYLAECRHMGIHVLPPDVNASKGRFAADGTDIRFG
LGAVRNVGAAAVEAILRARREKGRFADFYDFLAKVDQVVCNRKTIESLIKAGAFDSLGHS
RRGLLSVHADALDAVSIVKRNEAVGQFDLFGAPLMTAPPVPTMEWDKPERLAFEREMLGL
YVSDHPLRGLEHVLRAAADRPIAALAEEGTVPDGAVVRLAGILSGVQRKVTRQGRPWAQA
VLEDLDGTIEVMFFPDTYEQVDQWVAEDAVVALKGRVDRREEAPRIMVMDLSLPDLTAPA
PPSPQVTPAAVADDDALAATGRAPGRMGS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcagtgtcgctgataatcccgttccgtggtgcagtcggcttcacgataggtgg
acgtatgacgccgtgcgggggactgcccgggcgggagggaagcggccccggaatcttgat
tttctgtcgtaccccccgagtagcgtcgctgccgtgggcttcgttcatctgcacgttcat
accgagtattcgatgctcgacggggccgcgcgcctcggcccgctcttcgccgaggccgcc
cggctcggccagcccgcgctggccatgaccgaccacggcaacatgttcggcgcccacgac
ttctaccaccaggcgatcagggccgggatcaagccgatcatcggcgtcgaggcctacctg
acgccgggcacgcaccgcggcgaccgcacccgggtccgctgggccgacggcggcgagaac
gacgtctccggcggcggcgcctacacccacctcacgctgctggcggccgacgccaccggc
ctgcgcaacctgtttcgcctcacctcacgggccagcacggagggatacttctacaagccg
cgcgccgaccgcgaactgctcgccgaatacgcgcccgggctcatcgccaccaccggctgc
ccgtccggcgaggtccagacctggctgcgcatcggcgacttcgagcgggcctgccgggcc
gcgggcgagctgctcgacatcttcggccccggcaacctctacctggagctgatggaccac
ggcctgcagatcgagacccgggtccgggccgacctgctgcgcctcgggcgccggctcggg
ctcgccccgatcgcgaccaacgacctgcactacaccttcgccggtgacgccgacgcccac
gaggcgctgctcgccgtgcagtccgcgaccaccctggccgacccgaagcggttcaagttc
gacgcccgtgacttctacctcaagtcggccgcggagatgcggcggatctgggacgccgag
gtccccggcgcctgcgacaacaccctggccgtggccgagcggatcggcgactacgcggac
gtcttcgcccaccgcagcctgatgcccaccttcccggtgccgcccggcaccaccgaggac
gccgtcctgcgagccgaggtcgagcgcggcctggcccggcgcttcccgcacggcgtctcc
gaggcccacgccaaccaggccgcctacgagctgtcggtgatcctcggggccgacctcgcc
ggctacttcctggtcgtcgccgacctcgtcgcccacgcccacgcgcagggcatccgggtc
ggcccgggccgcgggtcggcggccggctcccttgtcgcctacgcgctgggcatcaccgag
ctcgacccgctcgcgcacgggctgctcttcgagcggttcctcaaccccgagcggccgagc
atgcccgacatcgacatggacttcgacgagcgccggcgcggcgagatgatccgctacgcc
accgagcaatacggcgaggaccgcgtctcccagatcatcacctacggcaccatcaaggcc
aaggcggcgatcaaggacgccgcccgcgtgctgggcttcccgttctccctcggtgagcgg
atcagcaaggcggtgccgccgccggtgctcggccgtgacatgcccctgtccggcgtgttc
gacccggcgcacccccggttcaaggagggcggcgagctgcgccggctctacgagtccgag
cccgaggtgcgcaccgtcgtcgacaccgcccgcggcctggaggggctcaagcggcagtgg
ggcgtccacgcggccggggtgatcctgtcgcgcgagccgctgatcgacgtcctgccgatc
cagaagcgggagcaggacggcgcgatcatcacccagtgggacatgggcgcgtgcgaggac
atgggcctgctcaagatggacttcctcggcctgcgcaacctcacgatcatcgacgacgcc
ctcgacgcgatccgcgacaaccgccgccgcgaggtcgtcatcgaggacgcgccgctcgac
gacgccccgacctatgcgctgctgtcccggggcgacacgctcggcgtcttccagttcgag
gccacgccggtccggcacctgctgcgctcgatggccccggacagcttcgccgacgtgtcg
gcggtcggtgcgctctaccggcccgggcccatcgcggcgaacgcccacaacgaatacgcc
gaccgcaagaacggccgccgcccggtcaccccgatccaccccgagctggccgagcccctg
gccgacatcctcggcgacacctacggcctgatcgtctaccaggagcaggtcatggcgatc
gcccagcgggtcgccggctacacgctcggcgccgccgaccggctccggcgggccatgggc
aagaagaagaaggagatcctcgaccaggagttcaccgacttcgccccggccatgcgcgag
cgcggctactcggagggcgcgatccgcaccctgtgggacatcctcgtgccgttctccgac
tacgcgttcaacaaggcccacagcgtcgcctacgggctcgtcgcctactggacggcctac
ctcaaggccaacttcccggccgaatacatggccgccctgctcacctccatcggcggcgac
aaggaccgctccgccgtctacctcgccgagtgccggcacatgggcatccacgtgctgccg
cccgacgtcaacgcctccaagggccgcttcgccgccgacggcaccgacatccgcttcggc
ctcggcgccgtgcgcaacgtcggcgccgccgcggtggaggccatcctccgggcccgccgc
gagaagggccgcttcgccgacttctacgacttcctggccaaggtcgaccaggtcgtgtgc
aaccgcaagaccatcgagtccctgatcaaggcgggcgcgttcgactccctcggccactcc
cgccgcggcctgctcagcgtccacgccgacgcgctcgacgcggtctcgatcgtcaagcgc
aacgaggccgtcggccagttcgacctgttcggcgccccgctcatgaccgccccgcccgtc
cccaccatggagtgggacaagcccgagcgcctcgccttcgagcgcgagatgctcggcctc
tacgtctccgaccacccgctgcgcggcctcgagcacgtcctgcgggccgccgccgaccgc
cccatcgcggcgctggccgaggagggcacggtccccgacggcgccgtggtccgcctggcc
ggcatcctctccggcgtccagcgcaaggtcacccgtcagggacgcccgtgggcccaggcg
gtgctcgaggacctcgacggcaccatcgaggtcatgttcttcccggacacctacgagcag
gtcgaccagtgggtggccgaggacgcggtggtcgccctcaagggccgggtggaccgccgc
gaggaggcgccccgcatcatggtcatggatctctcgctgcccgacctgacagctccggcc
ccaccgtccccgcaggtcacaccggccgccgtggccgacgacgacgcgcttgccgcaacg
gggcgcgcgcctggcaggatgggatcgtga
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