Dactylosporangium matsuzakiense: Dmats_39985
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Entry
Dmats_39985 CDS
T08700
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
dmat
Dactylosporangium matsuzakiense
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmat03021
]
Dmats_39985
Transcription machinery [BR:
dmat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dmats_39985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_24
HTH_3
HTH_31
Sigma70_ECF
HTH_AsnC-type
MarR_2
NirdL-like_HTH
HTH_Tnp_ISL3
MarR
HTH_Tnp_4
HTH_19
HTH_37
DUF7343
HTH_IclR
IF2_N
DksA-like_N
KORA
Phage_antitermQ
DUF1492
Motif
Other DBs
NCBI-ProteinID:
UWZ43572
LinkDB
All DBs
Position
complement(8759006..8759821)
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AA seq
271 aa
AA seq
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MTAPTIRRTAPIGRAPGKEAETAAASLLTLLADLPPESPDRPRIRARLIELYFPLAEYLA
RRFRNRGEPLDDLTQVAGVGLIKSVDGYDPSRGAAFTSYAIPMIVGELKRHFRDKGWDVR
VPRRLQELRLELGKVSGDLAQELGRSPTVADLATRVGVSEEEVIEGLESGHAYRALSINA
PLGGIAEDTGAELADLLGGADRELEAVDDRESLRPLIARLPEREQRIIAMRFFGNLTQTQ
IAERLGISQMHVSRLLAHALTFLRGELAEPF
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcccaccattcgccgcaccgctcccatcggccgcgccccgggcaaggaagcc
gaaacggccgccgcatcgctgctcacgctcctggccgaccttccgccggaaagccccgac
cggccccgcatccgggcccggctcatcgagctgtacttcccgctggccgagtacctggcc
cgccgcttccgcaaccgcggcgagcccctcgacgacctgacccaggtcgccggcgtcggc
ctcatcaagtccgtggacggctacgacccgtcccgcggcgccgccttcaccagctacgcg
atcccgatgatcgtcggggagctcaagcggcacttccgcgacaagggctgggacgtccgc
gtgccccgccggctgcaggagctgcgcctcgagctcggcaaggtctccggcgacctggct
caggagctgggccgctcgccgaccgtcgccgacctcgcgacccgcgtcggggtaagcgag
gaggaggtcatcgagggcctcgagtcgggccacgcgtatcgcgcgctgtccatcaacgcc
cccctcggcggcatcgccgaggacaccggcgccgagctcgcggacctcctcggcggcgcg
gaccgcgagctggaggcggtcgacgaccgggagtcgctgcgcccgctcatcgcccgcctg
ccggagcgcgagcagcgcatcatcgcgatgcgcttcttcggcaacctgacgcagacccag
atcgccgagcgcctcggcatctcccagatgcacgtctcccgcctcctggcccacgccctc
accttcctgcgcggtgagctcgccgagccgttctga
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