Dactylosporangium matsuzakiense: Dmats_43995
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Entry
Dmats_43995 CDS
T08700
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dmat
Dactylosporangium matsuzakiense
Pathway
dmat03420
Nucleotide excision repair
dmat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dmats_43995 (pcrA)
03430 Mismatch repair
Dmats_43995 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmat03400
]
Dmats_43995 (pcrA)
Enzymes [BR:
dmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dmats_43995 (pcrA)
DNA repair and recombination proteins [BR:
dmat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dmats_43995 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Dmats_43995 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
CHX17_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
UWZ44269
LinkDB
All DBs
Position
complement(9665440..9667839)
Genome browser
AA seq
799 aa
AA seq
DB search
MHALFEVPQSRPPQPEAPAVPARPPMRDLLDGLNGPQRDAVTHEGQPLLIVAGAGSGKTK
VLTSRIAYLLAARHVHPGEIIAITFTNKAAGEMKERVAKLVGNRARLMWVSTFHSACVRI
LRNEHDHAGLKSTFSIYDADDSRRLMQLVARELDLDPKRYPARGLATQVSNLKNELIDPE
KFAGTAKGPAERALAEAYTLYQQRLTEAHALDFDDLIMRVVHLLQSHPEVAESYRRRFRH
VLVDEYQDTNHAQYMLVKELVGDTGELCVVGDADQSIYAFRGATIRNILEFERDYSNART
ILLEQNYRSTQTILSAANSVIGRNTERKPKRLWSDQGEGEQIVGYVADTEHAEADWVARE
IDRLSDNEGVRPADVAVFYRTNAQSRVFEEMFIRFGLPYKVVGGVRFYERKEVRDALAYL
RAVANEDDTVSVRRVLNTPRRGIGDRAEACIEALASRDRISFGAALRRASEAPGISTRAV
NAINEFVALLDDLRTLATTAMPEEVLEAALDRSGYLAEIEESTDPQEAGRVENLQELVSV
AREYTERAEATIAVAAEQGDATVAPPPSVAGFLEQVSLVADADQIPSDDPDHTGVVTLMT
LHTAKGLEFPVVFLTGLEDSVFPHQRAMSDRKELEEERRLAYVGITRARQRLYISRAVTR
SAWGAPSYNPPSRFLEELPPELVRWERTDAAYTSWSGRAGVGGRSSGATQSRTSSFVGNT
PKAAQLAAKLGLDPSKLSTASELQREVPNFAVGDRVNHQRYGLGRVLAVEGAGPRAQAQI
DFGDQVVWLVLRHAAIEKL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctctcttcgaagtacctcagtctcgcccgccgcagcccgaagctccggcggtg
cccgcccgacctccgatgcgcgacctgctggacgggctcaacggcccccagcgcgacgcg
gtgacgcacgaggggcagccgctgctcatcgtggccggcgccgggtccggcaagacgaag
gtgctcacgagccggatcgcctacctgctggccgcgcgccacgtgcacccgggcgagatc
atcgcgatcacgttcaccaacaaggccgccggcgagatgaaggagcgggtcgccaagctg
gtgggcaaccgcgcccggctgatgtgggtgtccacgttccactcggcctgcgtgcggatc
ctgcgcaacgagcacgaccacgcggggctcaagtcgacgttctcgatctacgacgccgac
gactcgcgccggctcatgcagctcgtcgcccgggagctggacctcgacccgaagcgctac
ccggcccggggcctggcgacgcaggtgtcgaacctgaagaacgagctcatcgatcccgag
aagttcgccggcaccgccaaggggccggccgagcgggcactggcggaggcatacacgctg
taccagcagcgtctcaccgaggcccacgcgctcgacttcgacgatctgatcatgcgggtg
gtccacctgctgcagagccacccggaggtcgccgagagctaccgccggcgcttccggcac
gtgctcgtcgacgaataccaggacaccaaccacgcgcagtacatgctggtgaaggagctg
gtcggcgacaccggcgagctctgcgtggtgggcgacgccgaccagtcgatctacgccttc
cgcggcgcgacgatccgcaacatcctggagttcgagcgcgactactccaacgcccgcacg
atcctgctggagcagaattaccgctccacccagacgatcctgtccgcggccaactccgtg
atcggtcgcaacaccgagcgcaagccgaagcggctgtggagcgaccagggcgagggcgag
cagatcgtcggctacgtcgccgacaccgagcacgccgaggccgactgggtggcccgcgag
atcgaccggctctccgacaacgagggcgtccgcccggccgacgtcgcggtgttctaccgc
accaacgcgcagtcccgcgtgttcgaggagatgttcatccgcttcggcctgccctacaag
gtcgtcggcggtgtccgcttctacgagcgcaaggaggtccgcgacgcgctggcatacctg
cgggccgtggccaacgaggacgacacggtgagcgtgcgccgcgtcctcaacaccccgcgc
cggggcatcggcgaccgggccgaggcgtgcatcgaggccctcgcgagccgggaccgcatc
tccttcggcgccgccctgcgccgggcgagcgaggcccccggcatctccacccgcgccgtc
aacgcgataaacgagttcgtggcgctgctcgacgacctgcgcaccctggccacgacggcg
atgcccgaggaggtcctcgaggccgcactcgaccgctccggctacctcgccgagatcgag
gagagcaccgacccgcaggaggccggccgcgtcgaaaacctccaggagctcgtcagcgtc
gcccgcgaatacaccgagcgcgccgaggccaccatcgccgtcgcggccgagcagggcgac
gccaccgtcgcgccgcccccgagcgtcgccggcttcctggagcaggtctccctcgtcgcc
gacgccgaccagatcccgtccgacgaccccgaccacacgggcgtcgtcacgctcatgacc
ctgcacaccgcgaagggcctcgagttcccggtcgtcttcctcaccggcctcgaggacagc
gtcttcccgcaccagcgcgcgatgagcgacaggaaggagctggaggaggagcgccgcctg
gcctacgtcggcatcacccgggcccgccagcgcctctacatctcccgcgccgtgacccgc
tccgcctggggcgccccctcctacaacccgccgtcgcgcttcctggaggagctcccgccg
gagctggtccgctgggagcgcacggacgccgcgtacacgagctggtccggccgcgccggc
gtcggcggccgctcgtcgggcgccacccagtcccgcacctcgtcgttcgtcggcaacacg
ccgaaggccgcgcagctggcggccaagctgggcctcgacccgtccaagctgtccacggcc
agcgagctgcagcgcgaggtccccaacttcgccgtcggcgaccgcgtcaaccaccagcgc
tacgggctcggccgggtgctggcggtcgagggcgccgggccgcgggcccaggcccagatc
gacttcggcgatcaggtggtgtggctggtgctgaggcacgcggcgatcgagaagctgtag
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