Deinococcus metallilatus: E5F05_01065
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Entry
E5F05_01065 CDS
T09847
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
dmb
Deinococcus metallilatus
Pathway
dmb02010
ABC transporters
dmb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E5F05_01065 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5F05_01065 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmb02000
]
E5F05_01065 (lsrA)
Transporters [BR:
dmb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
E5F05_01065 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_29
MukB
RsgA_GTPase
AAA_30
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QBY06578
LinkDB
All DBs
Position
unnamed1:235425..236936
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AA seq
503 aa
AA seq
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MAYAASPDGPPGPPPAALVEICDVWKIFGGVPVLRGVNLTLRAGEIHALLGGNGAGKSTL
MKVLAGLYRPERGEVRLLGTLLGQASPAAVHRLGAYLVPQEPLLFPNLSVLENVTLRLPR
EADQRSRLEKLMNLLELELDLRLPARYLDVAQQQLVEILRGLMRRARVLILDEPTSSLTP
KETQLLFGRLRRLTQDGVGIFFISHKLHEIRELCDAISVLRDGEIVLRGRPEDFTDAGIV
RAMTNEDPGQSSREVNRQVGTQAALQVVEYAGEGFGPLTFDLHAGEVLGIAGVIGSGRTE
LAETIVGLRQPDQGQVRMGEQTLRPGSHRAALDAGVVYLTEDRQHQGLFLDTSIAWNTSS
AVLHREGWLLDAGRVHRQARQMIEELAIRCQGPGQELRQLSGGNQQKALIAKCLACEPRV
LILDEPTRGVDVLARNEIYAIIDALAARGVAVLLISSDFEEVARLSDRALIMRQGLITGE
LHGEQLTPEAIAGRCFERRPVPV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatgcggcttcacccgacggtccacccggtcccccgccagcggcgctggtcgag
atttgcgatgtctggaagattttcggcggcgtgccggtgctccggggcgtcaacctgacc
ctgagggcgggcgagatccacgccctgctgggcggcaacggtgcgggcaagagcaccttg
atgaaagtgctggccgggctgtaccggccggaacgcggcgaggtgcggctgctcggcacc
ctcctgggccaggcgtcccccgccgccgtgcatcgtctcggggcctacctggttcctcag
gagcccctgctctttcccaatctcagcgtgctggagaatgtcaccctgcgtctgccccgt
gaggcggatcagcgctcccggctcgagaagctgatgaatctgctggaactcgagctcgac
ctccggctgccagcccgctacctcgatgttgcccagcagcagttggtggagatcctgcgc
ggtctgatgcgccgcgcccgggtcctgatcctcgacgagccgacttcctcgctgacgccc
aaggagacgcagctcctctttggccgcctgcgccgactgacccaggacggcgtcggcatc
ttcttcatttcccacaagctgcacgagattcgcgaactctgtgacgccatcagcgtgctg
cgggacggggagatcgtgctgcggggccgccccgaggacttcacggacgctggcatcgtc
cgggcgatgaccaacgaggatcccggccagagcagccgcgaggtgaaccggcaggtcgga
acccaggccgccttgcaggtggtggagtacgcgggggagggcttcggcccgctgaccttc
gaccttcatgcaggcgaggttctcggcattgctggcgtgatcgggtccggccgcaccgaa
ctggccgaaaccatcgtcgggttgcgccagcccgatcaggggcaggtccgcatgggcgag
cagacgctgcgccccgggtcacaccgcgcggcgctggacgcgggcgtggtctacctgacc
gaggaccggcagcaccagggcctcttcctggacacctccatcgcctggaacacctccagt
gcagtcctgcaccgtgaggggtggctgctggatgccgggcgggtccaccggcaggccagg
cagatgatcgaggaactggcgatccgctgccagggtccgggtcaggaactgcggcagctt
tcgggcggcaaccagcagaaggccctgatcgccaagtgcctggcctgcgagccccgggtg
ctgatcctggacgagccgacccgcggggtcgacgtgctggcccgcaacgagatctacgcg
atcatcgacgcgctggccgcgcggggcgtggccgtgctgctgatctcctcggacttcgag
gaggtggcccggctgagtgaccgcgccctgatcatgcgccagggcctcatcaccggggag
ctgcatggggaacagctcacgccggaggccatcgccgggcgctgcttcgagcggaggccg
gttcccgtatga
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