Deinococcus metallilatus: E5F05_01545
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Entry
E5F05_01545 CDS
T09847
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dmb
Deinococcus metallilatus
Pathway
dmb00521
Streptomycin biosynthesis
dmb00523
Polyketide sugar unit biosynthesis
dmb00525
Acarbose and validamycin biosynthesis
dmb00541
Biosynthesis of various nucleotide sugars
dmb01055
Biosynthesis of vancomycin group antibiotics
dmb01100
Metabolic pathways
dmb01110
Biosynthesis of secondary metabolites
dmb01250
Biosynthesis of nucleotide sugars
Module
dmb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E5F05_01545 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E5F05_01545 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
E5F05_01545 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E5F05_01545 (rfbB)
00525 Acarbose and validamycin biosynthesis
E5F05_01545 (rfbB)
Enzymes [BR:
dmb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
E5F05_01545 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
KR
HGD-D
Motif
Other DBs
NCBI-ProteinID:
QBY06664
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All DBs
Position
unnamed1:346592..347659
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AA seq
355 aa
AA seq
DB search
MAEAAGTGAGAVLLVTGGCGFIGSNFVRWWLENVPGTRVVVYDKLTYAGRRENLAELWDR
PDLHLMVGDIADLARVRRTCLEERVTTLVNFAAESHVDQSIAAPLLFTDTNVRGTHALLE
VARELGLRFHQVSTDEVYGDVPAGERRAEGDPLAPRSPYAASKAAADHLALAYHATYALA
VTVTRGSNTVGPYQYPEKVLPLFATSVLRGEPLPLYGDGLQQRDYMHVRDHCAAIAAVLR
SGQPGEVYNVGTGTELTNLDLACAVLDTLGGDRGLIRHVGDRPGHDRRYAVATGKVRALG
WLCRFTPIQAVTEAARWYAENGWWWRPIREGDFREYYRRQYAERLTQPGKPEGEP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctgcgggcacaggcgccggagcggtgctgctggtcaccgggggctgcggg
ttcatcggcagcaatttcgtgcgctggtggctggagaacgtccccggaacgcgggtggtg
gtctacgacaaactcacctacgcgggacgccgcgagaacctggcggagctgtgggaccgg
cccgacctccacctcatggtgggggacatcgcggaccttgcccgggtccggcggacctgc
ctggaggagcgcgtgaccaccctcgtgaacttcgcggcggagtcgcacgtggaccagtcc
atcgcggcgccgctcctctttaccgacaccaacgtgcggggcacccacgcgctgctggag
gtcgcccgggaactgggcctgcgctttcatcaggtttcgaccgacgaggtgtacggcgac
gtgcccgcaggcgagcgccgcgccgagggggacccgctggccccgcgcagcccttacgcg
gccagcaaggctgccgccgaccacctggcgctggcctaccacgccacctacgcgctggcg
gtcacggtcacgcgcggctcgaacaccgtggggccttatcagtacccggaaaaggttctg
ccgctgttcgccaccagtgtcctgcggggcgagccgctccccctttacggtgacggcctg
caacagcgcgactacatgcacgttcgtgaccactgcgcggccatcgcggcggttctgcgc
tccggccagcccggcgaggtctacaacgtgggcaccggcacggaactgaccaacctggac
ctcgcctgcgcggtgctggacaccctgggcggggaccgggggctgatccggcatgtcggg
gaccgccccggacatgaccggcggtatgcggtggctaccggcaaggtgcgcgctctgggc
tggctgtgccggttcacgccgatccaggcggtgacggaagcggcccgctggtacgcggag
aacgggtggtggtggcgacccatccgcgagggcgacttccgtgagtactaccggcggcag
tacgccgagcgcctcacccagcccggaaagccggagggcgaaccgtga
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