Deinococcus metallilatus: E5F05_08900
Help
Entry
E5F05_08900 CDS
T09847
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dmb
Deinococcus metallilatus
Pathway
dmb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5F05_08900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmb03400
]
E5F05_08900
Enzymes [BR:
dmb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E5F05_08900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E5F05_08900
DNA repair and recombination proteins [BR:
dmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E5F05_08900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
DUF7573
Motif
Other DBs
NCBI-ProteinID:
QBY08054
LinkDB
All DBs
Position
617279..618178
Genome browser
AA seq
299 aa
AA seq
DB search
MPPRAVFPARHGYARSVPELPEVETTRRKIEPLLAGRTILNINHDAPHRYRDTHLAHGRR
VSGLSRRGKYLMLHLAAADAAEGDPHDLELIVHLGMTGGFRLEEGPHTRATLTTDAGTLY
FNDPRRFGKMVVVPAGEYRTMPTLAAMGPEPLSDDFREEDFARLAAQAGAVKPWLLSQKP
VSGVGNIYADESLWRARIHPAQTRLNAEEAGRLYHAIREVMAEAVEAGGSSLGDGQGNYC
QHDGEAGAFQVRHNVYGRPGEPCARCGTDIRKIVLGQRGTHFCPECQQLRAEGTGRRAE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ctgcctccccgcgcagttttcccggcccggcacgggtatgctcgctctgtgccggaactg
cccgaggtcgagacgacgcgccgcaagatcgagccgctgctcgcggggcgcaccatcctg
aacatcaaccacgacgcgccgcaccgttaccgggacacccacctcgcgcacggccgccgg
gtcagcggcctgtcgcgccggggcaagtacctgatgctgcacctggccgccgccgacgcg
gccgagggcgacccccacgacctcgaactgatcgtgcatctgggtatgacgggcggtttc
cggctggaggagggaccgcacacccgcgcgaccctcacgaccgacgcgggcaccctctac
ttcaacgacccgcgccgcttcggcaagatggtggtcgtgcctgcgggcgaatatcgcacc
atgcccaccctcgccgcgatgggaccggagccgctctccgacgacttccgggaggaggac
ttcgcgcggctggccgcccaggccggggccgtcaaaccctggctgctctcccagaagccg
gtcagtggcgtgggcaacatctacgccgacgagagcctctggcgtgcccggattcatccc
gcgcagacccgcctgaacgccgaggaagcgggccgcctctaccacgccatccgcgaggtg
atggccgaggcggtggaggcgggcggcagttccctcggtgacggccagggcaactactgc
cagcacgacggcgaggcaggcgccttccaggtccggcacaacgtctatggccgccccggt
gaaccctgcgcccgctgcggcacggacatccggaaaattgtgctggggcagcgggggacg
catttctgcccggagtgtcagcaactccgcgcggaaggcacagggcggagggcagaatga
DBGET
integrated database retrieval system
