Deinococcus metallilatus: E5F05_10560
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Entry
E5F05_10560 CDS
T09847
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dmb
Deinococcus metallilatus
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmb03016
]
E5F05_10560 (truD)
Enzymes [BR:
dmb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
E5F05_10560 (truD)
Transfer RNA biogenesis [BR:
dmb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E5F05_10560 (truD)
Prokaryotic type
E5F05_10560 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QBY10280
LinkDB
All DBs
Position
complement(956239..957318)
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AA seq
359 aa
AA seq
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MVGGIVSLVFEWSALAALTETPGTGGRLRAAPEDFRVEEVPAYPLSGEGEHLFVHLEKTG
HTTAHVLRELGAQVGVRDRDVGVAGLKDRHAVTTQWISLPAKYEERLAAFDLAGVRVLET
RRHGNKLGLGHLRGNRFVVRVRDAAGTADRAVTTLALLAAHGIPNYFGPQRFGLKGLNAE
EGLRVLRGESRLRDPRVRRFLTTSVQSLVFNRFLSLRLERGLFDRLLAGDMAKKHDTGGV
FLVEDAAAESPRAERGEVSATGTLFGKKVKPLTLDAGELEREALAAFGLTPEVFASRRGD
RRLTRVFPEQTEVRPEEDGYTVAFTLPKGSFATSVLREVMKTDVDTAAGDPDEGDEDTE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcggcatcgtgagtctggtttttgagtggtcggcgctggccgcgctgacggag
acgcctggaacggggggccgtctgcgggcggcaccggaggatttccgggtggaggaggtg
cccgcctatcccctctccggggagggcgagcatctgtttgtgcatctggagaagacggga
cacaccaccgcgcacgtgctgcgcgaactgggcgcgcaggtcggcgtgcgggaccgggac
gtgggggtggccgggctgaaggaccgccacgcggtcacgacgcagtggatcagcctgccc
gcgaagtacgaggagcggctggcggccttcgatctggcgggcgtgcgcgtgctggagacg
cggcggcacggcaacaagctggggctggggcacctgcgcggcaaccgcttcgtggtgcgg
gtgcgggacgcggcggggacggcggaccgggcggtgaccacgctggccctgctcgcggcg
cacggcatcccgaactacttcgggccgcagcgtttcgggttgaagggcctgaacgccgag
gaggggttgcgggtgctgcgcggcgagtcccgcctgcgcgacccccgcgtgcgccgcttt
ctgaccaccagcgtgcaaagtctggtgttcaaccgctttctcagcctgcgattggagcgc
ggcctcttcgaccggctcctggcgggagacatggcgaaaaagcacgacaccgggggcgtc
tttctggtggaggacgcggcggccgagtccccccgcgccgagcggggcgaggtgagcgcc
accggcaccctcttcggcaagaaagtcaagccgctgacgctggacgcgggcgaactggaa
cgcgaggctctggcggccttcggcctgacgcccgaggtcttcgcctcgcgccggggggac
cgccgcctcacgcgcgtcttccccgagcagaccgaggtccgccccgaggaggacggttac
acggtggcctttaccctccccaagggcagttttgccaccagcgtcctgcgcgaagtgatg
aagaccgacgtggacacggcggcgggcgacccggacgagggcgacgaggacaccgaatga
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