Deinococcus metallilatus: E5F05_11330
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Entry
E5F05_11330 CDS
T09847
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dmb
Deinococcus metallilatus
Pathway
dmb02024
Quorum sensing
dmb03060
Protein export
dmb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
E5F05_11330 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
E5F05_11330 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5F05_11330 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dmb02044
]
E5F05_11330 (ffh)
Enzymes [BR:
dmb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
E5F05_11330 (ffh)
Secretion system [BR:
dmb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
E5F05_11330 (ffh)
Eukaryotic Sec-SRP protein
E5F05_11330 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_30
cobW
AAA_31
AAA_25
AAA_33
ABC_tran
ATP_bind_1
MMR_HSR1
VirC1
Zeta_toxin
AAA_16
Thymidylate_kin
DUF6374
AAA_17
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QBY08479
LinkDB
All DBs
Position
1113197..1114549
Genome browser
AA seq
450 aa
AA seq
DB search
MFEALGNKLQDILDRVGRESKLTDAQVKAAMREIRMALLEADVNFNVAKDFVAKVSEKAV
GQEVQGSLTGGQTVVKLVHDELIETLGGESKQPTLKTDGNVWFMVGLQGAGKTTSTGKLA
AFYKSKGRRVLLVAADTQRPAARDQLEVLAKQVGVPVLKVNDGETPQETRRRLDEYLKTD
YRDLVIVDTAGRLQIDEALMDQLADLQTELHPSETLLVVDAMTGQEALNVARVFDERVNL
SGLIITKMDGDARGGAALSARSVTGHPIYFAGTSEKLTGLEPFYPDRVAGRILGMGDVLG
LIERAQQADLKAMEVKKPGDFDLEDLLLQLRQIRKMGPLGDLLKLIPGMSRALPEGFNVD
EKQIQRIDAMISSMTVKERRNPKIIDGRRRKRIAAGSGHTVQDINRLLKMHEQMKDMMKM
LQRFSGPGGKGMGKGMKPPKLPPMPPQMKR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggcgctcggaaacaagttgcaggacatcctcgaccgcgtcgggcgggagagc
aaactcaccgacgcgcaggtcaaggctgccatgcgcgagattcgcatggccctgctcgaa
gcggacgtgaacttcaacgtcgccaaggattttgtcgccaaggtcagcgagaaggccgtc
gggcaggaggtgcaggggtcgctgaccggcgggcagaccgtcgtgaagctcgttcacgac
gaactgatcgagacgctcggcggcgagagcaagcagcccacgctcaagaccgacgggaac
gtctggttcatggttggcctccagggcgcgggcaagaccaccagcaccggcaagctcgcc
gccttttacaagagcaagggccgccgcgtgctgctcgtcgccgccgacacccagcgcccc
gccgcccgtgaccagctcgaagtgctggcgaaacaggtgggcgtgccggtcctcaaggtg
aacgacggcgagacgccccaggaaacgagacgccgcctcgacgagtacctcaagaccgat
taccgcgacctggtgatcgtggacaccgcaggccgcctccagatcgacgaggcgctgatg
gaccagctcgcggacctccagaccgagctgcaccccagcgagacgctcctggtggtggac
gcgatgaccggccaggaggcgctgaacgtggcccgcgtgttcgacgagcgcgtgaacctc
tccggcctgatcatcacgaagatggacggtgatgcgcgcggcggcgcggccctctcggcg
cgcagcgtcaccgggcacccgatctacttcgcgggcaccagcgagaagctgacgggcctc
gaacccttctaccccgaccgcgtggcgggccgcatcctcggcatgggtgacgtgctgggg
ctgatcgaacgtgctcagcaggccgacctcaaggcgatggaggtcaagaagcccggcgac
ttcgacctggaagacctgctacttcaactgcgccagattcgcaagatgggaccgctgggc
gacctcctcaagctgatccccggtatgagccgcgccctacccgaaggcttcaacgtggac
gagaaacagattcagcgcatcgacgcgatgatctcctcgatgaccgtgaaggaacgccgc
aaccccaagatcatcgacgggcgccgccgcaagcgcatcgcggcgggcagcggccacacc
gtgcaggacatcaaccgtctgctgaagatgcacgagcagatgaaggacatgatgaagatg
ctccagcgcttcagcggccccggtggcaaggggatgggcaagggcatgaagcctcccaag
ctgccccccatgccgccgcagatgaaacgctga
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