Deinococcus metallilatus: E5F05_12010
Help
Entry
E5F05_12010 CDS
T09847
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dmb
Deinococcus metallilatus
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmb03400
]
E5F05_12010
DNA repair and recombination proteins [BR:
dmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5F05_12010
Archaeal homologous recombinant proteins
E5F05_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_15
AAA_21
ABC_tran
E7
Motif
Other DBs
NCBI-ProteinID:
QBY08598
LinkDB
All DBs
Position
complement(1245597..1248329)
Genome browser
AA seq
910 aa
AA seq
DB search
MRPLSLEVQGFTSFRQHTALDFSDLELFALVGPTGSGKSSLLDAMTFALYGHTPRLGTKG
LDALISSGERGLSVSLTFEAGGETYRAARSKGRRQAENEVRLERREGGRWVNLSDGGVAA
VNDRIRRVVGLDFKTFARTVLLPQGEFSKLLHGTGKERQALLGELMGLEHVEAMRVFAGD
RAKAFKHTLGSLHALLDGEYAGVTEEAVKTLRAEREAVDAEAERLADTRERLQGQVNRLR
ALEGVWTAREDTARRLNVLETRAAGVREGAARAERARRVAGVLPLLDAAERARIAAGREA
GERDRAAAAEASARRAVDAAAVTLGAAQDAEARIPDLEAREGALREAEADAARLKRAGGT
PQTTHASPLPWDEDAHFAAREAAQKLDKLRQERIQLEAQKAALEAGRERQRTEQAQQEAL
QQEQKRVEREGKQAKADYDRAQAEVQAARLEAGLAAYHAHLHVGEPCPLCEQTVRVLPRA
SGVDLAALDRQVTALQGTLENRRLRYKEIGLELGNLKKSIEARTAELADWEAALEQRELD
LKQLEAQISGDPHDLALRLLSGLAKRVRAAGTDPARERQKLLAEVKGIRARLNEAQTTLA
RAQSAHAAAQATLTSARSAAESRAREAGEAQAALEAALSALALDAAQARAAALPEADIAA
LEAAARTHAAQVEQLRAQLTELDRQLGLEPFDPAQLRQAERDLIATDAALSAARERAGRL
AEQERSARERLKRRAEIEAQAGDLAAKLDTWQTLANTLRANEFQQYLLAEVEARLLTGAG
TLLYDISDGRYRLALEDGEYVVQDLWNTGETRAVKTLSGGETFLASLSLAIALSDYLAGN
KILGALFLDEGFGTLDPQALEAVAGALENLRTQGRMVGVVTHVESLSERLPSRLIVTKSV
AGSSVQRLDG
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgctcagcctggaagtccagggctttacctccttccggcagcacaccgcgctg
gatttctccgacctggaactgttcgcgctggtggggccgaccgggagcggcaagtcgagc
ctgctggacgcgatgaccttcgcgctgtacggccatacgccgcggctgggcaccaagggg
ttggacgcgctgatctcgtcgggggagcgggggctgtcggtcagcctgaccttcgaggcg
ggcggcgagacgtaccgcgcggcgcgcagcaagggccgccgccaggccgagaacgaggtg
cggctggaacggcgcgaggggggccgctgggtgaacctcagcgatgggggcgtcgcggcc
gtgaacgaccggattcgccgggtggtgggcctggacttcaagaccttcgcgcgcacggtg
ctgctgccgcagggcgaattcagcaagctgctgcacggcaccggcaaggaacggcaggcg
ctgctgggcgaactgatgggcctggagcacgtggaggccatgcgcgtcttcgcgggcgac
cgcgccaaggcgttcaagcacacgctgggcagcctccacgccctgctggacggcgaatac
gcgggcgtgaccgaggaggcggtcaagactttgcgggccgaacgcgaggcggtggacgcc
gaggccgaacgcctggccgacacgcgcgaacggctccaggggcaggtcaaccgcctgcgc
gcgctggaaggggtctggaccgcccgtgaggacacggcccgccgcctgaacgtgctggaa
acccgcgccgccggggtgcgcgagggcgccgcgcgggccgagcgggcgcggcgcgtggcg
ggcgtgctgccgctgctggatgcggcggagcgggcacgtatcgccgccgggcgggaggcg
ggcgaacgcgaccgggccgctgccgccgaggccagcgcccggcgggccgtggacgcggcg
gccgtgacgctcggggccgcccaggacgccgaggcccggatccccgacctggaggcccgc
gagggcgccctgcgcgaagccgaggccgacgccgcccgcctgaaacgcgcggggggcacc
ccgcagaccacccacgcctcgcccctcccctgggacgaggacgcccactttgctgcgcgc
gaggcggcgcagaagctcgacaagctgcggcaggagcgcattcagctggaggcccagaag
gcggcgctggaagcgggccgcgaacggcaacgaaccgagcaggcgcagcaggaggccctc
cagcaggaacagaagcgggtcgaacgcgagggcaaacaggccaaggcggactacgaccgc
gctcaggcggaggtgcaggccgccaggctggaggcggggctggctgcctaccacgcccat
ctgcacgtgggcgaaccctgcccgctgtgtgagcagaccgtgcgggtgttgccccgggcg
tccggcgtggacctcgccgcgctggaccggcaggtgacggccctgcaaggcacgctggaa
aaccgccgcctgcggtacaaggaaatcgggctggaactggggaacctgaagaagtccatc
gaggcccggaccgccgagctggccgactgggaagcggcgctggaacagcgcgaactcgac
ctcaaacagcttgaggcgcagatcagcggcgacccgcacgacctggcgctgcgtctgctc
tcagggctggcgaagcgggtccgggcggcgggaaccgatccggcccgcgaacggcagaag
ctgctggcggaagtgaaaggcatccgggcccggctgaacgaggcgcagaccaccctcgcc
cgcgcgcagagcgcccatgctgcggcgcaggccaccctgacttcggcccgcagcgcggcg
gagagccgggcccgggaggcgggggaagcgcaggcggcgctggaggcggccctctcggca
ctcgccctcgatgcggcccaggcccgcgccgccgccctccccgaagcggatatcgccgcc
ctggaggccgccgcccggactcacgcggcccaggttgagcagctccgggcgcaactcacg
gaactggaccggcagctcggcctggaacccttcgacccggcccagctccggcaggccgaa
cgcgacctgatcgccaccgacgccgccctcagcgccgcgcgtgagcgggcgggccgcctg
gccgagcaggaacgcagcgcccgcgaacgcctgaagcgccgggccgagatcgaggcgcag
gcgggggacctggccgcgaagctcgacacctggcagaccctcgccaataccctgcgcgcc
aacgagttccagcagtacctcctggccgaagtggaggcgcggctgctgacgggcgcgggt
acgctgctctatgacatcagcgacggccgttaccgcctcgcgctggaggacggcgagtac
gtcgtgcaggacctctggaacaccggcgagacgcgcgccgtgaagaccctctcgggcggc
gagacgttcctcgccagcctcagcctcgccattgcgctcagtgattacctcgccggaaac
aagattctgggcgccctgtttctggatgaaggcttcggcacgctggacccgcaggcgctg
gaagccgtcgcgggtgcgctggaaaatctgcggacgcagggccgcatggtgggcgtggtg
acgcacgtggagagcctgtcggagcggctgcccagccgcctgatcgtcaccaagagcgtg
gcgggcagcagcgtgcagcggctggacgggtga
DBGET
integrated database retrieval system
