Deinococcus metallilatus: E5F05_12025
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Entry
E5F05_12025 CDS
T09847
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dmb
Deinococcus metallilatus
Pathway
dmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5F05_12025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmb03400
]
E5F05_12025
Enzymes [BR:
dmb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E5F05_12025
DNA repair and recombination proteins [BR:
dmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5F05_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
OB_YrrC
AAA_11
HHH_5
AAA_16
nSTAND3
AAA_28
TraI_hel_assoc_N
PhoH
AAA_22
AAA_25
AAA
NTPase_1
NPHP3_N
Helicase_RecD
UvrD_C
KTI12
MeaB
ETF_alpha
AAA_18
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QBY08601
LinkDB
All DBs
Position
1250306..1252423
Genome browser
AA seq
705 aa
AA seq
DB search
MTAAPPTEPFRVTGGVNKVRFRAESGFTVMTARLRNSEGEDPDATVIGVMPPLEAGDTFS
AEVLMEEHREYGYQYRVLNMVLEAQPADLTEAGVAAYLEARVGGVGKVLAGRIAKTFGPA
TFDLLEQEPEKLLQVPGITQSTLHKMVSSWSQQGLERRLLAGLQGLGLSISQAQRAVKHF
GEAALERLQADLFALTEVEGIGFLTADKLWSAQGLPHDDPRRLTAAAVYALQQAGQQGGH
SFLPRERAERGVVHYTRVSPEQARLAVETAVELGRLSDDPAPDGSARIYLPHVLRAEKKL
AQLIRTLLATPPAADEWSVPAGAAKGLSEEQAQVLHLLEDHRLVVLTGGPGTGKSTTTRA
VADLAEKLGLEVGLCAPTGKAARRLGEVTGRSASTIHRLLGYGPAGFRHNHLEPAPYDLL
IVDEVSMTGDALMLSLLAAVPPGARVLLVGDTDQLPPVDAGLPLLAIAQSAPTVRLSTVY
RQAAENPIIRAAHGLLHGQAPQWGDLRLDLTETEPDVGARRVALMVRELGGPTQVQVLTP
MRKGPLGVELLNTHLQALFNPGQGGIRIADGEARPGDMVVQTKNDYGNEVFNGTIGTVLK
AEGNRLTVDFDGNIVELAGAELFNLQLGYALTVHRAQGSEWPTVLGVLHEAHMPMLSRNL
VYTALTRARERFYAVGSASAWAKAAGRQREERNTALLERIRGRPA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgcgccccccactgaacccttccgcgtcacgggcggcgtgaacaaggtccgt
ttccgcgccgagagcggcttcaccgtgatgaccgcccgccttcgcaactcggaaggcgag
gaccccgacgccaccgtgatcggcgtgatgccgccgctggaggccggggacaccttcagc
gccgaagtgctgatggaagaacaccgcgagtacggctaccagtaccgcgtgctgaacatg
gtgctggaggcgcaacccgccgacctgaccgaagcgggcgtggcggcctacctcgaagcc
cgggtcggcggcgtgggcaaggtgctggcggggcgcatcgccaaaacgtttggtccggcc
accttcgacctgctggaacaggaaccggaaaagctgctgcaagtgcccggcatcacgcaa
agcacgctgcacaagatggtgtccagttggtcgcagcagggcctggaacgccgcctgctt
gccgggttgcagggcctgggcctcagcatctcgcaggcgcagcgggcggtgaagcacttc
ggggaggcggcgctggaacgcctgcaagccgacctcttcgcgctgaccgaggtggagggg
atcggcttcctgaccgccgacaagctgtggagcgcgcagggccttccccacgacgacccc
cgccgcctgaccgccgccgccgtgtacgcgcttcagcaggcggggcagcagggcgggcac
tccttcctgccgcgcgaacgggcagagcggggggttgtccactacacgcgcgtttcaccg
gagcaggcccgcctcgcggtggaaaccgccgtggaactgggccgcctctccgacgacccc
gccccggacggttccgcccgcatctaccttccgcacgtcctccgggccgagaagaagctc
gcccagctcatccggaccctgctcgccacgccgcccgccgccgatgaatggagcgtgccc
gccggggccgcgaaggggctgtcggaagaacaggcgcaggtgctgcatctgctcgaagac
caccgcctcgtggtgttgaccggcggtcccgggacgggcaaaagcacgaccacgcgggct
gtcgcggacctcgcggagaaactggggctggaggtcggcctctgtgcgcccaccggcaag
gccgcgcgccgcctgggggaagtcaccggccgcagcgcctccaccattcaccgcctgctg
ggatacggcccggcgggcttccggcacaaccacctcgaacccgcgccctacgacctcctg
atcgtggacgaggtgagcatgacgggggacgcgctgatgctctcgctgctcgccgccgtc
ccgcccggagcgcgggtgctgctggtgggcgacaccgatcagctccccccggtggatgcg
gggctgccgctcctcgccatcgcgcagtcggcccctaccgtccgcctcagcaccgtgtac
cggcaggccgccgagaacccgatcatccgcgccgcgcacggtctgctgcacggccaggcc
ccgcagtggggcgacctgcgcctggacctgacggagacggaacccgacgtgggcgcgcgc
cgcgtcgcattgatggtccgcgaactcggcgggccgacacaggtgcaggtgctcacgccc
atgcgaaaggggccgctgggtgtggagctgctgaacacccacctccaggccctcttcaac
cccggtcagggcggcatccgtatcgcggacggcgaggcgcggcccggcgacatggtggtg
cagaccaagaacgattatggcaatgaggtcttcaacggcaccatcgggacggtcctcaag
gccgaggggaaccgcctgacggtggacttcgacggcaacatcgtggaactcgcgggagcg
gaactcttcaacctgcaactcggctacgccctgaccgtccaccgcgcgcagggcagcgag
tggcccaccgtgctcggcgtgctgcacgaggcgcatatgccgatgctgtcgcgcaacctc
gtctacacggccctcacccgcgcccgcgaacgcttctacgccgtgggttcggcgtcggcc
tgggcaaaggcggcgggcaggcagcgcgaggagcggaacacggcgctgctggaacgcatc
cggggccgcccggcctga
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