Deinococcus metallilatus: E5F05_18560
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Entry
E5F05_18560 CDS
T09847
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dmb
Deinococcus metallilatus
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmb03032
]
E5F05_18560
03400 DNA repair and recombination proteins [BR:
dmb03400
]
E5F05_18560
Enzymes [BR:
dmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E5F05_18560
DNA replication proteins [BR:
dmb03032
]
Prokaryotic type
DNA Topoisomerases
E5F05_18560
DNA repair and recombination proteins [BR:
dmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E5F05_18560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QBY09761
LinkDB
All DBs
Position
complement(2580924..2581973)
Genome browser
AA seq
349 aa
AA seq
DB search
MAGRTDLLHDEYLHREGNKLGEFRYFWPDGEEYTDEEGLARIASLAVPPAYTDVYVSPDP
DAELQAFGRDAAGRLQYRYHSDFVQAGALKKWQRLARFAGALPTLRTVTATDLRLSGLPR
RKVLAVMSRLLHVAHFRVGSDAYAREHKTYGLSTLRQRHVKVSGQDITFKFRGKHSILQE
KTVRNRTLATNIERLLELPGPWLFQSMDDEVRTRVRAHDLNSYLREVIGPFTAKDFRTWG
GTLLAAEFLAEAGAPESDRQARKTIVECVKFVADDLGNTPAVTRSSYICPVIFDRYQEGK
VLDDYEPRANRTEPELEGLTRAEAALKRMLESEKALRTRRGRKKEPEAA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcaccgaccttctgcacgacgagtacctgcaccgcgagggcaataaactg
ggcgagttccgttacttctggcccgacggcgaggagtacaccgacgaggaaggcctggcc
cgcatcgcgtcgctggcggtgccgcccgcctacacggacgtgtacgtctcgcccgacccg
gacgcggaattgcaggcgttcggacgggatgccgccgggcgcctccagtaccgctatcac
tccgacttcgtgcaggcgggggcgctgaagaagtggcaacggctggcgcgcttcgcgggg
gccttgccgaccctccgcaccgtgaccgccactgacctgcgcctctcgggcctgcctcgc
cgcaaggtgctggcggtcatgtcccggctgctgcacgtcgcgcatttccgggtgggcagc
gatgcctacgcccgcgagcacaagacttacggcctctccaccctgcggcagcggcacgtg
aaggtgagcgggcaggacatcaccttcaagttccggggcaagcactccatccttcaggag
aagacggtccgcaaccgcacactggcgaccaacatcgagcggctgctggaactgcccggc
ccctggctctttcagagcatggacgacgaggtccgtacccgcgtccgtgcccatgacctg
aacagctatctgcgcgaggtgatcggccccttcaccgccaaggatttccgcacctggggc
ggcacgctgctggccgccgagttcctggccgaagcgggcgcgcccgagtcggaccgccag
gcccgcaagaccatcgtggagtgcgtgaagttcgtggccgacgatctgggcaacaccccc
gccgtcacgcgcagcagctacatctgcccggtgatcttcgaccgctatcaggaaggcaag
gtgctggacgactatgaaccgcgcgccaaccggaccgaacccgagctggagggcctgacc
cgcgccgaggccgcgctgaagcggatgctggagagtgaaaaggcgctgcggacgagaagg
gggaggaagaaggagccggaggccgcctga
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