Deinococcus metallilatus: E5F05_19105
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Entry
E5F05_19105 CDS
T09847
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dmb
Deinococcus metallilatus
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmb03016
]
E5F05_19105 (thpR)
Enzymes [BR:
dmb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
E5F05_19105 (thpR)
Transfer RNA biogenesis [BR:
dmb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
E5F05_19105 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QBY09860
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All DBs
Position
2684228..2684923
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AA seq
231 aa
AA seq
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MTKIRKAPRPPMKPVPRAEAPEAQPSPTAQDRTLRLFYALKVPGDAAAPLAEAQRQLRGN
WRPVRADQFHITLAYLPAVPPEKVDDLKRLGAALTKDLPPMQIQLRGTGYFPNEGSPRVW
FVKVEAEGLTDLATGLRDGVHALGLKTDDLPFKAHVTLARKKGPAPRIPPLTFDLGWQAG
HAALIRSILRKTGPIYDTVSTFRFRGAASGQLPATSENTPPLTIHPPEETP
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagatcaggaaagcaccccggcctcccatgaagcctgtcccccgggccgaagcg
ccggaagcccagccctcccccacggcccaggaccggaccctccgcctcttctacgccctc
aaggtgcccggtgacgcggccgcccctctcgcggaagcgcagcggcaactgcgcggcaac
tggcgccccgtccgcgcggaccagttccacatcaccctcgcctacctgcccgccgtgccg
ccagagaaggtggacgacctcaagcggctgggcgccgcactgaccaaagacctcccgccc
atgcaaatccagttgcgcggtaccggctacttccccaacgagggcagcccgcgcgtctgg
ttcgtgaaggtggaggcggaaggactgaccgacctggcaaccggcctgcgcgacggcgtt
cacgccctgggcctcaagaccgacgacctccccttcaaggcccacgtcaccctcgcgcgc
aaaaaaggcccggctccccgtatcccccccctcaccttcgacctcggctggcaggcgggc
cacgcggccctgatccgcagcatcctccgtaagaccggcccgatctacgacaccgtgagc
accttccgcttcaggggagcggccagcggccagcttccagcgaccagcgaaaacacccct
ccactcaccattcatcccccagaggagacgccatga
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