Deinococcus metallilatus: E5F05_19750
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Entry
E5F05_19750 CDS
T09847
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dmb
Deinococcus metallilatus
Pathway
dmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5F05_19750 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmb03400
]
E5F05_19750 (priA)
Enzymes [BR:
dmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5F05_19750 (priA)
DNA repair and recombination proteins [BR:
dmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5F05_19750 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
Zn_ribbon_PriA
Motif
Other DBs
NCBI-ProteinID:
QBY09979
LinkDB
All DBs
Position
complement(2808697..2811222)
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AA seq
841 aa
AA seq
DB search
MTPPASPPSPAARPPVPWQVVVPLPVPALEYAAPHGYGGAVPVGCRVLVPWRGELTVALV
VGGGEGRGSHRLREAVHLLDDEEGPWVPPATVQAITTWARDARLPAGLVWGDLLGVGWSV
KLDHRVRAVPGADLGAFARHVPTSTWTDAAGFAPALLDAVREQGLLEEAFRPVTRTRGMV
RARPLSVVPAAARTVTVLRAAPEAPSLTPKGQVAWAWLEQHGPQDTLSGWARGAGVSAGV
VTNVLNAGGAQYVPEEAPPPPAWTWLRDNGPVESLSAWANGAAAGGVPLSPTLAAGLAAR
GWADTVQEPAPPPPLPEPAPPWTTSDPDRLPEAPAWRLHGGRPTSRFRTLGPRVARLLSQ
GRGVLVLAPDHATLRRAWEGLSGLAAGAGTRAVQVSGALGEVQRDHAWNLIRLGEARLVI
GSYLALTAPLPDPALVIVLEEGSDAYKLPAGSHAFIPDVAARVAAAHDAALALVGSAPAA
ESVPLPGAVLPPPRARVHVVDYAHPPEQPELGPLSSVHLTPGDLGYPLSHDLARLLRQVQ
ERGRQAALLAPRRGYSALLRCPSCEHTPQCCNCDVPLRFHQETRQLTCHQCGYHQAIPDR
CDECGERMWKARGPGTEWIAAEVAKLTPGLPVYRCDRDRQDDLAPLHAGESGVVVGTQLL
LAQDAPPNLALIGVTLADTWLNVSDFRASERYHRLLRQLAEWHPDRAPLIVVQTFQADHP
ALKVLVEGRDALAYPAAEERARAALGYPPHARLAQVEVAARDPQKAKIAAQEVFDALHGA
GATAAEVLGPAPSPVARLRGVYPYHLLLRARDDTRLAQLLATLDRSWKARVRVDVNPRGG
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccgcctgcctcccccccctccccggcggcgcggcccccggtcccctggcaggtg
gtggtgccgctcccggtcccggccctggagtacgccgcgccgcacgggtacgggggcgcg
gttccggtgggctgccgggtgctggtgccctggcggggcgagctgaccgtggccctggtg
gtgggcgggggggaaggccggggcagccaccgcctgcgcgaagccgtccacctcctcgac
gacgaggaaggcccctgggtgcctcccgcgaccgtgcaggccatcaccacctgggcacgg
gacgcgcggctccccgccgggctggtgtggggtgacctgctgggcgtgggctggagcgtg
aagctggatcaccgcgtgcgggcggtgccgggggcggacctgggcgcctttgcccgccac
gtgcccacctcgacctggaccgatgcggcgggctttgccccggccctgctggacgcggtc
cgcgagcaggggttgctggaggaggcttttcggccagtcacgcgcacgcggggtatggtg
cgtgcccgtccgctgtccgtcgttcccgccgctgcccggacagtgaccgtgctgcgcgcg
gccccggaagctccttcgctgacgccaaaaggacaggtggcgtgggcgtggctggagcag
cacggcccgcaggacaccctcagcggctgggcgcggggtgcgggcgtgagcgccggggtg
gtgacaaacgtgctgaacgcgggcggggcgcagtacgtgccggaggaggcccccccgccc
cccgcctggacctggctgcgggacaacggcccggtggagtcgctgagcgcctgggcgaac
ggcgcggcggcgggcggcgtgcccctctcgcccacgctggcggcgggcctcgcggcgcgg
ggctgggcggatacggtgcaggaacccgccccgcccccgcctcttcctgagcctgccccc
ccctggaccacctccgatcccgaccggctgccggaagctcccgcctggcggctgcatggc
gggcggcccacctcgcgcttccggacgctcgggccgcgcgtggcccgcctgctttctcag
gggcgcggcgtgctggtcctcgcccccgaccacgccaccctgcgccgcgcctgggagggg
ctgtcgggcctcgcggcgggggcgggcacccgcgccgtgcaggtcagcggcgctctgggg
gaggtgcagcgcgaccacgcctggaacctgatccgtttgggcgaggcgcggctggtgatc
ggcagttacctggccctgaccgcgccgctcccggaccccgcgttggtgatcgtgctggag
gagggcagcgacgcctacaagctgcccgccggttcgcacgcctttatcccggatgtggcc
gcgcgggtggccgccgcgcatgacgccgccctcgccctggtgggcagcgcccccgctgcc
gagagcgtgccgctgccgggcgcggtgctgccgccgccgcgtgcccgcgtgcatgtggtg
gactacgcccatccccccgagcagccggaactggggccgctctccagcgttcaccttacg
cccggcgacctgggctacccgctcagccacgacctcgcgcggctgctgcggcaggtgcag
gagcgcgggcgtcaggcggcgttgctcgcaccccggcgcggctattccgccctgctgcgc
tgcccgagttgcgaacacaccccgcagtgctgcaactgcgacgtgccgctgcgcttccac
caggaaacccgccagctcacctgtcaccagtgcggctaccaccaggccatccccgaccgc
tgcgacgagtgcggcgagcggatgtggaaggcgcgaggccccggcacggaatggatcgcg
gcggaggtggccaagctcacccccggcctcccggtctaccgctgcgaccgtgaccgccag
gacgacctcgcgcccctgcacgcgggggagagcggcgtggtggtggggacccagctcctg
ctcgcgcaggacgcgccacccaacctcgcattgatcggcgtgaccctggccgacacctgg
ctgaacgtctcggacttccgcgcctccgagcggtatcaccgcctgctgcgccaactggcc
gagtggcaccccgaccgcgcgcccctgattgtcgtgcagaccttccaggccgaccacccc
gcgctcaaggtgctggtggagggccgcgacgccctggcctaccccgccgccgaggaacgc
gcccgcgctgccctgggctatcccccccacgcccggctggcgcaggtggaggtggccgcc
cgcgacccccagaaagcgaagatcgcggcccaggaagtcttcgacgcgctgcacggcgcc
ggggccaccgccgccgaagtcctcggcccggcccccagtccggtcgcccggctgcgcggc
gtgtatccctatcacctgctgctgcgcgcccgcgacgacacgcgcctggcgcaactcctc
gccacgctggaccgcagttggaaggcgcgggtccgggtggacgtgaacccgcgggggggg
ttgtag
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