Deinococcus metallilatus: E5F05_20150
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Entry
E5F05_20150 CDS
T09847
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dmb
Deinococcus metallilatus
Pathway
dmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5F05_20150 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmb03019
]
E5F05_20150 (rny)
Messenger RNA biogenesis [BR:
dmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E5F05_20150 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
QBY10050
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All DBs
Position
2893868..2895556
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AA seq
562 aa
AA seq
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MTMLYFVLALLGGLAGGFLMGQSRGRQERAAIDDQLQREARAEADRIRAQAGSEARQLRE
QAEVRLRDAERRLQEADDRERQGTLQLETQREQLQTLRTQIEAERGQAKQDAARERETLS
ADRQETRRERDELKREIERLNRRAEQLDARGDKLDALEERLEDARHALAEQEADLAERAR
QIDLKLYEVAGLTREAAREQILGQLDAELEEEKAIRVKAMTERAVAEAKRTARNVIAQAI
QRSASETSAQMSVSVVPIPNDAMKGRLIGREGRNIRAFEALTGVDLIIDDTPEAVILSSF
NPVRREVARHVLEALVADGRIHPTRIEEMVHKAQDEMKSFIHAQGEEAAIEAGVVGVKPG
LIQLLGRMYFRSSYGQNVLKHSVQVAHLTGIMADELGLDAALARRAGLMHDVGKSIDREI
EGTHVEIGINLAKRFGEPPEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARREEL
EAYVRRLEQLEQIAVAFPGVQQAYAIQAGREVRVIVQPEKVTDAQATLLAREIAGRVEQD
MEYPGQVQVTVVRESRAVEVAR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctgtacttcgtgctggcgctcctgggggggttggcaggcgggtttttgatg
gggcagtcgcggggacggcaggaacgggccgccatcgacgaccagctccagcgcgaagcc
cgcgccgaggcggaccgtatccgggcgcaggcgggcagcgaagcccggcaactgcgcgag
caggccgaggtgcgcctgcgggacgcggagcgccgccttcaggaagccgacgaccgggaa
cgccagggcaccctccagttggagacgcaacgggaacaactccagacgctccgcacgcag
atcgaggccgagcgcggccaggccaagcaggacgctgcgcgggaacgcgagacgctgagc
gccgaccgccaggaaacccggcgcgaacgtgacgaactcaaacgtgagatcgagcgcctg
aaccgccgcgccgaacagctcgacgcccggggagacaaactcgacgcgctggaagagcgc
ctggaggacgcccggcacgcgctggccgagcaggaggccgacctggccgaacgtgcgcgg
cagatcgacctgaagctgtacgaggtcgcgggcctcacccgggaagccgcccgggagcag
attctgggccagctggacgcggaactggaggaggaaaaggccatccgcgtcaaggcgatg
accgagcgcgcggtggcggaggccaaacgcaccgcccgcaacgtgatcgcgcaggccatc
cagcgcagcgccagcgagacgagcgcccagatgagcgtgtcggtggtgccgatccccaac
gacgcgatgaagggccgcctgatcggccgcgagggccgcaacatccgcgccttcgaggcg
ctgaccggcgtggacctgatcatcgacgacacccccgaggccgtgatcctgagcagcttc
aacccggtgcggcgcgaggtggcgcggcacgtgctggaagccctggtggccgacggccgc
atccatcccacccgcatcgaggagatggtccacaaggcccaggacgagatgaagagtttc
attcacgcccagggcgaggaggcggccatcgaggcgggcgtggtgggcgtcaagccgggg
ctgatccaactgctgggccggatgtacttccgcagcagctacggccagaacgtgctgaag
cactccgtccaggtcgcgcacctgaccggcatcatggccgacgagctggggctggacgcc
gcgctggcccgccgcgccgggctgatgcacgacgtgggcaagagcatcgaccgcgagatc
gagggcacccacgtcgagatcggcatcaatctggccaaacggttcggggagccgccggaa
gtcatcgacgccatcgcccaccaccacgaccccgagaacggcgagacgctgtacagcgtg
ctggtcgccgccgccgacgccatcagcgcggcccggcccggtgcacgccgtgaggaactc
gaagcctatgtgcgccgcctggaacaactggaacagatcgcggtcgccttccccggcgtg
cagcaggcctacgcgatccaggcgggccgcgaggtgcgcgtgatcgtgcagcctgaaaag
gtcacggacgcccaggccaccctgctggcccgcgagatcgccgggcgggtcgagcaggac
atggagtaccccggccaggtgcaggtcacggtggtgcgcgagagccgcgcggtggaagtc
gcgcgctaa
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