Dehalococcoides mccartyi BTF08: btf_1077
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Entry
btf_1077 CDS
T02475
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dmc
Dehalococcoides mccartyi BTF08
Pathway
dmc03420
Nucleotide excision repair
dmc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
btf_1077
03430 Mismatch repair
btf_1077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmc03400
]
btf_1077
Enzymes [BR:
dmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
btf_1077
DNA repair and recombination proteins [BR:
dmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
btf_1077
MMR (mismatch excision repair)
Other MMR factors
btf_1077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ResIII
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGG08153
LinkDB
All DBs
Position
complement(994267..996483)
Genome browser
AA seq
738 aa
AA seq
DB search
MQDILTGLNPAQKKAVEAVEGPVLILAGPGSGKTRVITHRIAYLIKVVGITPHRIMAVTF
TNKAAREMETRLNQLAPSAVGRLTMGTFHAICARILRQDGLPLGVPSDFVIYDDDDQQSL
IKQAMAELELDPKRYPPASIKNAISQAKSQLVLPAYYFEKGRSYFEEMVGRVYELYEKRL
KQNKALDFDDLLLKVVQLFKQHPEVLAGYQERYLHVMVDEFQDTNLVQYELVKMLSAKYR
NICVVGDPDQSIYSWRSADLRNVFNFETDNPGAKVILLEQNYRSTKNILEAASCVIAPNS
GRKPISLWTENESGQPIAVVETFNEQEEAQFVVSEIEKLTRYEKFSPGDIAILYRTNAQS
RALEEAFIRYGMPYRLVSGTRFYQRREVKDIVAYLRLLQNPQDSVSLQRVINIPTRGIGA
KTLSDLAQFAREQDISLYQSLINLSDENAPKPPIPSRGLKPLTDFGALLKSLIIDAQTLP
LLNLLDRLLEGISYRGFLFASEDGEERWDNILELRTVAQQYQEILPPEGLSAFLESVALV
SDLDSLEEGVSAVTLITLHQAKGLEYPVVFMVGMEEGVLPHNRSFDDPAQMQEERRLCYV
GVTRAKKRLYLVRAFRRSLMGQSNVNEPSRYLKDIPQSITKGREKQPLLGQQTPGQAVLP
VIKQHVQSAGMLVKSAPSPAPKLLELEAGDRVLHPQFGEGIVTSINRMKNDAEVMISFHS
VGMKRLLLSFARLTKLEN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatactaacaggtctaaaccccgctcaaaaaaaggccgttgaagccgtggaa
gggccggtgcttatactggccggtccgggcagtggtaaaaccagagttattacccaccgg
attgcctacctgataaaagtagtaggtataactccccaccgcattatggctgttactttt
accaataaagccgcccgcgaaatggaaacccgcttgaaccagctggctccttcagcggtg
ggacgcctgaccatgggtactttccacgctatttgtgcccgcatactaaggcaggacggt
cttcctctgggtgtgccgtctgactttgtgatatacgatgatgacgaccagcagagcctt
ataaaacaggccatggctgagcttgagcttgacccgaaacgttatccgcccgcttccata
aaaaatgctatcagccaagccaaaagccagctggtgcttccggcctattactttgaaaag
ggcaggagctattttgaagagatggtaggcagggtttatgaactctatgagaaacgcctc
aagcagaacaaggctctggattttgatgaccttttgttaaaggttgtccagctttttaag
caacaccctgaggtgctggccggataccaggaacgctatctgcatgtaatggtagatgag
tttcaagataccaatctggttcagtacgaactggtcaagatgctttcagccaagtaccga
aatatctgtgtggtgggtgaccctgaccagtctatttattcatggcgttctgcagacctt
agaaatgttttcaactttgagactgataatccgggtgcgaaagtgattttgcttgagcag
aactatcgctccactaaaaatattctggaagcagcttcatgtgttattgccccgaacagc
ggacgcaagcctatcagtttgtggaccgaaaacgaatccggccagcctatagctgtggtg
gaaacctttaacgaacaggaagaagcccagtttgtggtttctgaaattgagaagctcacc
cgctatgaaaagttcagccccggagatatagctattctctaccgcaccaacgcccagtcg
cgggctttggaggaagcttttatccgttacggcatgccttaccgtctggtttccggcact
cggttctaccagcggcgcgaggttaaagatattgtggcctatctgcgtttacttcaaaac
ccgcaagatagcgtcagcctccaaagggttataaatatacccacccgcggaataggggct
aaaaccctttcagaccttgcccagtttgccagagagcaggatataagtctctaccagtca
cttataaatttgtcagatgaaaatgcccccaaaccgccaatacccagccgcggtttgaaa
cccctgactgattttggggctttgctgaaatcactcatcattgatgctcaaaccctgcca
cttttaaacctgctggacaggctgcttgagggtataagctaccgtggatttctgtttgca
tccgaagacggagaggaacgctgggataatatacttgagttgcggactgttgcccagcag
tatcaggaaatactcccgcccgaagggctttcggcctttctggaaagtgtggcactggtc
tcggatttggatagccttgaagaaggtgtttcggcagttacccttatcaccttgcatcag
gctaaagggctggagtatccggtggtttttatggtgggtatggaagagggtgtcttgccc
cacaaccgttcgtttgatgatcctgcccagatgcaggaagaacgccgtctgtgctatgtg
ggtgtaacccgtgccaagaaacgcctttatctggtgcgggctttccgccgctcacttatg
gggcagagcaacgtaaatgaaccttcccgttatcttaaagacatacctcaaagcattacc
aaaggccgtgaaaaacagcctctgcttgggcagcaaacccccggacaggcggttttgcct
gttataaaacagcatgtgcaaagtgcgggcatgctcgttaagtctgccccgtctcctgcc
cccaaattactggaattggaagcgggtgacagagtgctgcacccccagtttggcgaaggg
attgtgaccagtatcaaccggatgaaaaatgatgccgaggttatgatatctttccattct
gtcggcatgaagcgcctgctgctcagttttgcccgcctgaccaaactggaaaactaa
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