Dehalococcoides mccartyi BTF08: btf_312
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Entry
btf_312 CDS
T02475
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dmc
Dehalococcoides mccartyi BTF08
Pathway
dmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
btf_312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmc03400
]
btf_312
Enzymes [BR:
dmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
btf_312
DNA repair and recombination proteins [BR:
dmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
btf_312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Trm112p
Zn_ribbon_6
AAA_16
FYVE_2
DUF6257
FtrD-like
Motif
Other DBs
NCBI-ProteinID:
AGG07420
LinkDB
All DBs
Position
complement(298601..301048)
Genome browser
AA seq
815 aa
AA seq
DB search
MAFAELAVNTPVLRPGSFSYSIPLGLEIKPGQAVWAPFGPKIVQGIVLEVTDQPAFGQTR
KICGVISDTPLLSFHQLNLAAWISQTYLCSIYEALSPMLPPSFERRSVAYISLEPTPLNK
SEKPPVTLSPSLQKIFDWLQTRDITPQTELENIFGKKTTQTAIPKLINQGLINRTYQISP
VRTQTKFEKHFGLSEQALAFIKDQTLTKLSPRQTEVFECLRENPQGISKSRLNLLVKNNA
AILKALEKKELILSEEHQVFRQPINYSQIETLPHLKLSPPQEKCLESINRSLNTPPEDDQ
NPRTFLLHGITGSGKTEIYLQALAEALRLGKKAIVLVPEISLTPQTIARFAGRFPGRVAV
LHSRLSPGEQFDEWQRIKNGQADIVIGPRSALFAPLDKPGIIIIDEEHEWTYKQQNSQPR
YHTRTVALKMTEEYGAVLVLGSATPDIDSYFKAQNGLYQLLELPERLTPYRGASLPKTEL
VDMRTELSEGNRSIFSRNLHASIEKVLAKHEQAILFINRRGGASFIQCRDCGYVAMCKSC
DTPLTYHPDQENLVCHQCGRHYPNPLTCPNCKSRRIKYLGMGTQKLEEETGLAFPQAKLL
RWDSDVTKGKDSHQQIMDKFSRHQADILIGTQMVAKGLDLPGVTLVGVINADISLNLPDF
RAGERTFQLLAQVAGRAGRGLAGGKVVIQTYTPENYAIQSAVCHDYPGFYAKEIAYRREL
NNPPFQKLACLVFSHLNHDFCQQQAILLAQTLREKADSTGSGTLEILGPAPAFIQRLRGR
YRYQIILRSPNPANFLRDINLGQGWSIDIDPYGLC
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttggcttttgccgaactggccgtaaacactccggtacttagaccgggcagtttttcctac
tccatacccttggggttagaaatcaaacccggccaggcggtctgggctcctttcgggccc
aaaatagttcagggcatagtccttgaagtaactgaccagccggcatttgggcaaacacgt
aaaatctgcggcgttatctctgatacgccgcttctttcttttcatcagcttaacctagcc
gcatggataagccaaacctatttatgcagcatctacgaagccctttcccccatgctgcct
ccgtcttttgaacgccgcagtgtagcctatatcagccttgagcccacaccattaaataaa
agcgaaaaaccgcctgtaaccctcagcccaagtttacaaaaaatatttgactggttgcag
accagagatattacccctcaaactgaactggaaaatatattcggcaaaaaaaccacccaa
accgccataccaaagctgataaatcaggggcttatcaaccgaacctatcagataagcccg
gtacggacacaaaccaaatttgaaaaacatttcggcctaagtgagcaggcactggcattt
attaaagaccagacactgacaaaattatctccccgccagaccgaggtttttgagtgcctc
cgggaaaacccgcaaggcatttccaaaagccggctgaatttgctggttaaaaataatgct
gcaatcttgaaagctctggagaagaaagagctaatactatctgaggagcatcaggtattc
cgccagccgataaattacagccaaatagaaaccctgccccaccttaaactgagccctcct
caggaaaagtgtctggagtctatcaaccgttccctgaatactccgcccgaagatgatcag
aatccccgtacctttttattgcacggaataaccggcagcggtaaaaccgaaatatacctg
caggcgctggctgaagccctgcgtctgggcaaaaaagccattgtactggtaccggagata
tcccttaccccccagactattgcccgttttgccgggcgtttccccggcagggtggccgta
cttcacagccgcctcagtcccggtgaacagtttgacgaatggcaaaggataaaaaacggt
caggccgatatagtaatcggacccagaagtgccctttttgccccgctggataaaccgggt
atcatcatcatagacgaagagcacgaatggacatataaacagcagaactctcaaccccgt
tatcacacccgcacagtcgccctaaaaatgactgaagaatatggtgcagttctggtgctg
ggcagtgccaccccggatattgacagctattttaaagcccaaaacggcctttaccagttg
ctggaactgcccgaacgcctgaccccctacagaggtgcttccctgcccaaaaccgagctg
gtagatatgcgcaccgaactttccgaaggcaaccggagtattttctcccgtaacctgcat
gcttcgattgaaaaagtactggcaaaacatgagcaggccatccttttcataaaccggcgg
ggcggtgccagttttatccagtgccgtgactgcggctatgtagccatgtgcaaaagctgt
gatacaccgcttacttaccaccctgaccaggaaaatctggtttgccatcagtgcggcagg
cattatcccaatcccctcacctgcccgaactgcaaaagccgccggattaaatatcttggc
atgggaacccaaaaactggaggaagaaaccgggctggcttttcctcaggcaaaactgctt
cgttgggatagtgatgttaccaaaggcaaagactcccaccagcagataatggacaaattc
agccgccatcaggcagacatactcatcggcacccagatggtagccaaggggcttgacctg
cccggagtaactctggtgggggtaataaacgcggatatcagcctgaacctgccggatttc
cgggcaggcgaacgcacttttcagctgctggcacaggtagccggacgggccggacggggt
ctggcaggcggcaaagtagttatccagacctacacacctgaaaattacgctatccagtca
gccgtttgccatgattatccgggtttttatgctaaagaaatagcctaccgcagagaactg
aataatccccccttccagaaattggcttgtctggttttcagtcatttgaaccatgacttt
tgtcagcagcaggctatacttttggcacaaacgcttcgggaaaaggctgattcgaccggt
tcaggcacgctggagattctggggccggctcccgcctttatccagcgcctgcggggacgt
taccgataccagataatcctgcgctcaccaaacccggccaatttcctccgggatatcaac
ctggggcaaggctggagtattgatattgatccatacggcttatgctag
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