Dehalococcoides mccartyi BTF08: btf_4
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Entry
btf_4 CDS
T02475
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dmc
Dehalococcoides mccartyi BTF08
Brite
KEGG Orthology (KO) [BR:
dmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmc03032
]
btf_4 (gyrB)
03400 DNA repair and recombination proteins [BR:
dmc03400
]
btf_4 (gyrB)
Enzymes [BR:
dmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
btf_4 (gyrB)
DNA replication proteins [BR:
dmc03032
]
Prokaryotic type
DNA Topoisomerases
btf_4 (gyrB)
DNA repair and recombination proteins [BR:
dmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
btf_4 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGG07117
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All DBs
Position
complement(3884..5812)
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AA seq
642 aa
AA seq
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MLDANKAKPGANSETYTASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDE
AMAGVCDRIKVIMFKDGSVSVEDNGRGIPVDIHSTTKISALETVMTVLHAGAKFGGKTYQ
VSGGLHGVGASVVNALSEWTTVKVRRNGKIYQQSYLRGKPSTPLEEVGVSEGSGTTTIFM
ADSQIFSTTEYDFETLTDRLREIAYLNKGLEVYIYDEKSDQERTYYFEGGITGFVRHLNR
NREVRHRQPIYITKKSDSTILEVAIQYNDGYSDSTLTFANCVNTVDGGTHLTGFRSALTR
AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES
AVAEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS
ERDASLCELFLVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAII
TALAAGIDNDFDPSKLRYNRLVLMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQP
PLYKIKIGSTEHWVYNDAEKEAILAQTKSTKVDIQRYKGLGEMSAEQLWRTTMDPASRTL
LEVKVEDAAKADQIFNLLMGGEVAPRKAFIQSHSRTVKNLDI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgcaaataaagccaaaccgggtgccaattcagaaacctatacagccagtgat
atccaggtactggaaggtctggccgctgtccgcaaaaggccgggcatgtatatcggctct
acagaccagcgggggttgcatcacctggtttatgaaattgtttataacagcgtagatgaa
gccatggccggggtatgtgaccggattaaggtcataatgtttaaagacggcagtgtcagc
gttgaggataacggccgcggtatcccggtagacattcactctactaccaagatttccgcc
cttgaaacggttatgaccgtcctgcatgccggtgccaaattcggcggcaagacctatcag
gtatccggcggtctgcatggtgtgggtgcttcagtggtaaacgctctgtccgaatggact
acagtcaaggtcaggcgcaacggcaaaatttaccagcaaagctacctgcgcggcaagccc
agcaccccgctggaagaagtgggagtatcagaaggttccggtaccaccactatattcatg
gctgattcacaaatattttccaccacggaatatgactttgaaaccctgactgaccgcctg
cgggagatagcctatctcaacaaggggcttgaggtatatatttacgacgaaaaatctgat
caggaacgtacttattactttgagggtggtattaccggctttgtacgccatctaaaccgc
aaccgcgaagtacgccaccgccagcccatttatataaccaaaaaatccgacagcactatt
ctggaagtagctatccagtacaatgacggctactcggattccacccttacctttgccaac
tgtgtaaataccgtagacggcggtacccacctgaccggttttcgttccgccctgacccgg
gcttttaatgactacgcccacaagtccaaatttcttaaagacaccgacccgaacctgatg
ggtgatgacgtacgtgaaggcatcgtagccatcgtcagcgtcaaactgcccgaaccccag
tttgagggacagaccaagggcaagctgggcaatattgaaataaagagttttgtggaaagt
gccgttgccgaacagctttccctttatctggaagaacatccggatgataccaaacgcata
ttagaaaaatgtataaccgccgccaaggcccgtgaagccgcccgcaaggcccgtgacctg
attatccgcaagagtgctctggatacaggcaccctgcctggcaagctggcagactgctca
gagcgtgatgcttcgctgtgcgaactgtttctggtagaaggtgattcagccggtggttca
gccaaacagggccgaaaccgccgctttcaggccatactcccgttacggggtaaaattttg
aacgtagaaaaggcttcacctgacaagatgctggctcacgaagaaatcagggccatcatc
accgctctggcagccggtatagataatgattttgacccctctaaactgcgctataaccgt
ctggtactcatgacagatgctgatgtggacggctctcatatacgaacactccttttaacc
tttttcttccgccatatgccccgccttattaccgaaagccatttattcattgcccagccg
cctctctacaagataaaaataggcagtaccgagcactgggtatacaatgatgctgaaaaa
gaggctatccttgcccagaccaagagcaccaaggtagatatccagcggtataaaggtctg
ggtgaaatgagtgccgagcaactctggaggactaccatggacccggccagccgcaccctg
cttgaagtaaaagtggaagatgccgccaaggctgaccagatttttaacctgctgatgggc
ggtgaagtagctccccgcaaggcctttatccagtctcactcccgcaccgtcaagaacctg
gatatctaa
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