Dehalococcoides mccartyi BTF08: btf_512
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Entry
btf_512 CDS
T02475
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dmc
Dehalococcoides mccartyi BTF08
Brite
KEGG Orthology (KO) [BR:
dmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmc03400
]
btf_512
DNA repair and recombination proteins [BR:
dmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
btf_512
Archaeal homologous recombinant proteins
btf_512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_21
TMF_TATA_bd
Rad50_zn_hook
RsgA_GTPase
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
AGG07618
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Position
complement(478909..481488)
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AA seq
859 aa
AA seq
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MIPVKLKIKNFMCYRGEIPPFSFNGIHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVISLNEQEAEVSLDFEISGELYQVIRQRQRPKKAGANGQSLLSLFSLQDEKPRNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLANILGLEIYDQLEDL
ARQAVREAEAKNLQIEQSIEDGKESLRSRPELEEALNHTRKDLAEGEGKLKIQLAELEIM
RHKKHSFDTKQNTCRQLDNDLKDISKDQSRWIQTLQEIKQRISTFETLSAQKEAIFKGFQ
EYSACQSLYDKHNRILAKLRQLENTKKPLEDAVYKEENNLKNTLGKYQERLKFRQDTAQT
LVILEKEKTQSDQLKTRLETEEAELKIQQNKLLNLQSSLARLETEHAVAVKEVNALEEKL
NLLAEAGENRCNCPLCETELGQDKLKLVFGKYKTEQDTQKNLQADLQEKLSQMQSDIQAL
LKYIETETNRLSHSHKQYERQISLLDKGIAEAKEAEIKAAEGRNLIAGIEKQLNERSYAT
AEQASLAVVEKEIQGLNFDNAEYTRNQQNLADLTPFEEKKRKLDEAINRLPLENDSLKKA
SSALAELTARRDNKLNEQQTLLKELAELPVLEKELGEAETEYKSLSQRQDTLRQQLGSLS
QKAEQINELEKKLKKQAQEKDQTTQEINYFGKLVRAFGKKDGIQTMLIEDTLPELETGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAIRI
ALSHLLANRLGAPLRTLIIDEGFGTQDTTGIERLKEAINSIQNEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcaaaataaaaaactttatgtgttaccggggcgaaataccgcct
ttttcttttaacgggatacatactgcctgtatctgcggtcaaaacggggcaggcaaatcc
gccctgatagatgccattacctgggcgctctggggaaaaagccgggctaagagtgacgat
gatgtgatttccctaaacgagcaggaagcagaagtcagccttgattttgaaatttcaggt
gaactttatcaggttatccgccagcgccaacgccccaaaaaggcaggggcaaatggacaa
agcctgttaagccttttttcactccaggatgaaaaaccccggaatataaccggagacacc
ctgacccagactgagaaaaagataatctccatactccatatggactatgacacctttata
aacagcgcctttctgaggcagggacatgccaaccagtttacccagcaaccccccggcaaa
cgtaaagaagtgctggccaacatactggggttagaaatatatgaccagctggaagatttg
gccagacaggctgtacgtgaagcagaagccaaaaacctgcagattgaacagagtattgaa
gatggcaaagaaagtctgaggtccagaccggaactggaagaagccctaaatcatacccgt
aaagacctggccgaaggtgaaggcaaattaaaaattcagcttgccgagctggaaattatg
cggcacaagaaacatagctttgacaccaaacaaaatacctgccgccagttggataacgac
ctgaaggatatttccaaagaccagtcccgctggattcaaaccctgcaagaaataaaacag
cgtatcagcacttttgaaacactctctgcccaaaaggaagcaatctttaaaggttttcag
gaatactccgcctgccagagcctgtatgataaacataaccggatactggctaaactaagg
caactggaaaataccaaaaagccccttgaagatgccgtttacaaagaagaaaacaatctt
aaaaataccttggggaaatatcaggaacgcctgaaattcaggcaagacactgcgcaaact
ctggtgatactggaaaaagaaaaaacccaatcagaccaactgaaaacccggttggaaact
gaagaggcggaactgaaaatccaacagaacaagctgcttaatctgcaaagcagcttggcc
agactggaaactgaacacgccgttgccgtcaaagaggtaaacgcacttgaagaaaaactg
aacctgctggctgaagcgggtgaaaaccgctgtaactgccctctatgcgaaactgaactg
ggacaagacaagctcaagctggtgtttggcaaatacaagacggaacaggatacccaaaaa
aacctgcaagcagatctgcaggaaaaactgagccagatgcaatcagatatacaagccttg
cttaagtacattgaaaccgaaactaaccgcctgagtcatagccacaaacagtatgaaaga
cagataagtctactggacaaagggattgcggaggctaaagaggctgaaataaaggcggcg
gaaggcagaaacctgattgcaggtattgagaaacaactgaacgaacggagctatgccact
gcggagcaggccagtctggcagtagtcgaaaaagaaatacagggactaaattttgataat
gccgaatatacccgaaaccagcagaatctggctgatttgaccccttttgaagaaaagaaa
cgtaaacttgacgaagcaattaaccgcctgccgctggaaaatgacagtctaaaaaaggca
tcctctgcactggcagagctgacagcccggcgtgataataaactaaatgaacagcagacc
ctgcttaaagagctggcggaattaccggtgcttgaaaaagaactgggagaagccgaaact
gaatataagtcactcagtcaaaggcaggataccctgaggcaacaactgggttcactcagc
cagaaagcagaacagataaatgagctggagaaaaagctgaaaaagcaagcacaagagaaa
gatcagaccactcaagaaataaattatttcggtaaactggtcagagctttcggcaaaaaa
gacggaatccagactatgcttattgaagacaccctgcctgaactggaaaccggagctgac
ctgttgctgtcgcgtatgactgacggccgcatgcaccttagcatagaaacccagcgttcc
accaaaaagggagaccaaaccgaaactctggatataaatatctcggatgaacttggcacc
cgcaactatgaaacctttagcggcggtgaggctttcaggatagattttgcgatcaggatt
gccctgtcacacttgctggcaaaccgtctgggcgcacctttgcggacacttatcattgat
gagggatttggcacacaggacactaccggcattgagcgcctgaaagaggccataaactct
attcagaacgagtttgacaagatactggtcataacccatatagatgacctgaaagattca
ttccccacccgcattgagatagacaaaaccccatccggctcagctatccgcctaaactaa
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