Dehalococcoides mccartyi BTF08: btf_930
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Entry
btf_930 CDS
T02475
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dmc
Dehalococcoides mccartyi BTF08
Brite
KEGG Orthology (KO) [BR:
dmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmc03016
]
btf_930 (truB)
Enzymes [BR:
dmc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
btf_930 (truB)
Transfer RNA biogenesis [BR:
dmc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
btf_930 (truB)
Prokaryotic type
btf_930 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGG08015
LinkDB
All DBs
Position
complement(863126..864028)
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AA seq
300 aa
AA seq
DB search
MDGILNINKPFGVTSFDVVAKVRRIYSQKRVGHGGTLDPYATGVIPVFLGRSTRLIEYLS
SVSKTYLAEIELGVETDSYDSEGEITFRKTCDYVTREMIYKTLMDFQGEIIQIPPMYSAV
KHRGMRLYNLARQGIEVERIPRVATIYGIELLNYTSPVLRVRIECGHGTYIRSLAFDLGR
KLGCGAYLKSLVREAYGQFNLANSLDFADLEAAKCDVKLAGILLPLETAIGHLPRVSLDE
ENITRLVNGLEITLDRIDKPEAVAVYNAENSFVAIIQPETDGTWHPAKVFIRQSPKPDAN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcctgaatatcaacaaacctttcggggtaacctcgtttgatgtggttgca
aaagtcaggcgtatttattcccaaaaaagggtagggcatgggggtactcttgacccgtat
gcaaccggagtaattccggtgtttttgggaagatctacccgtcttatagagtatctgtct
tccgtcagcaagacatatctggctgaaatagagctgggagtggagacggatagctatgac
agcgaaggcgaaatcactttccgcaaaacctgtgactatgttacccgtgaaatgatatat
aaaactttgatggattttcagggtgagataatccaaattccccctatgtatagtgccgta
aaacaccgcgggatgcgtctttacaatctggcaaggcaagggatagaggttgaaagaatt
ccccgggtagccacaatttatggcattgaactgcttaactacacttcaccggtactgcgt
gtacggatagaatgcggacacggcacatatattcgttctctggcctttgacttgggtaga
aaactgggttgcggggcgtatctgaaatctctggtaagagaggcatatggccagtttaat
ctggcaaactctctggattttgctgaccttgaggccgcaaaatgtgacgtgaaactggca
ggtattctcctcccgctggagacagccatagggcatctgccaagagtttcccttgatgaa
gagaatataacccgcttggtaaatggtctggagataacactggataggattgacaaacct
gaggctgtggccgtatacaatgctgaaaacagtttcgttgctataatccagccggagact
gacggtacttggcatccggctaaagtcttcataagacaaagcccgaaaccggatgcaaat
tag
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