Dehalococcoides mccartyi BTF08: btf_987
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Entry
btf_987 CDS
T02475
Symbol
lcfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmc
Dehalococcoides mccartyi BTF08
Pathway
dmc00061
Fatty acid biosynthesis
dmc01100
Metabolic pathways
dmc01212
Fatty acid metabolism
dmc02024
Quorum sensing
dmc04146
Peroxisome
Module
dmc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
btf_987 (lcfB)
00071 Fatty acid degradation
btf_987 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
btf_987 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
btf_987 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmc01004
]
btf_987 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmc04147
]
btf_987 (lcfB)
Enzymes [BR:
dmc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
btf_987 (lcfB)
Lipid biosynthesis proteins [BR:
dmc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
btf_987 (lcfB)
Exosome [BR:
dmc04147
]
Exosomal proteins
Exosomal proteins of breast milk
btf_987 (lcfB)
Exosomal proteins of breast cancer cells
btf_987 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGG08065
LinkDB
All DBs
Position
complement(906731..908248)
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AA seq
505 aa
AA seq
DB search
MNLADRLSEVVAACPEAVALKFEDKSITYAELDRISDCYAWALTRLGALAGERVVLLIPN
CLEFIYFYFGIVKIGAVAVPLDPKYKWPELKALLDDCQPKVLVCQTDGLNILHHHQSELG
FIQHYISLEDSSYPDIVLLKNFLANVPAMPFEFDVPETQTAHIAYTSAAQLRPQGVMISQ
SNLVRTAAISAGGFGQSNKDRVILFALPLHHIIGLVVVMLGTIFSGGSVIMLSGVSVDCL
LKTIEKESITVFLGVPFIHAMLVRHLRENSSEYNLASLRLCGSAGAPLPPELVLSYRVLL
DKDLVDFYGLTESTSHVTCQPLDRSGKPCSVGKVLGGFELEVVDSAGKLLAPSQAGEIII
RGPVMDGIYRQPEKTNQMLRNGWLYTGDIGYKDNDGFVYINYFIKPMLITKGQNIYFSDL
EDLLLSCPGVREVLAVGIPDPDGMRGEVVRVAVVLRDGVTQTSAGIKKYCLDNLAQYKTP
REIYILKDLPRDLLGLPCRDSLKQM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcttgctgataggctttcagaagtagttgcggcctgtcctgaggctgtggccctg
aaatttgaagataaaagtattacctatgcagagctggacaggatttctgactgttatgcg
tgggcacttacccgtcttggggcacttgcgggtgagcgggtggtacttctgataccaaac
tgccttgaatttatatatttttattttggtatagtcaaaataggggctgtggccgtgccg
cttgacccaaaatacaaatggccggagcttaaagccctgcttgatgattgccagcccaag
gtattggtttgtcaaacagatggactgaatattttgcatcaccaccagtctgaattaggt
tttatacagcattatatcagtctggaagacagcagttatccggacatagttttattaaaa
aattttctggcaaatgtacctgcaatgccctttgagtttgacgtgccagaaactcagact
gcccatatagcctatacctcggcagcccagttacgcccgcaaggtgtgatgataagccaa
tcaaatctggtcaggacggcagcaatatctgccggcgggtttgggcaaagcaacaaagac
agggttatcctgtttgctctgcctctgcatcatataatagggttggtggtggttatgctg
ggtactatattcagcggcgggagtgtcataatgctctcaggtgtttctgtagactgccta
ttaaagactattgaaaaagaaagcattacagtatttctgggtgttcctttcattcatgcc
atgctggttcgccacctgcgggaaaattcctctgaatacaatctggcttcactaagattg
tgcggcagtgccggtgcacctttgcctccggaactggtgctgtcatacagagttttactg
gataaagacctggtggatttttacggccttactgaatctacttctcatgtaacctgccaa
cctctggatagaagcggtaagccttgctcagtaggcaaagtgcttggcgggtttgagctg
gaagtggtggattcggccggcaaactgttagcgccgtctcaggcaggagagataattatc
cgtgggcctgtgatggacggaatttaccgccagcctgaaaaaaccaaccagatgttacgt
aacggctggctttataccggtgatatcggctataaagataatgacggatttgtttacata
aactattttatcaaacctatgcttattaccaaaggccagaacatatatttttctgacctt
gaagatttgcttctttcatgcccgggggtgagagaagtcctggcggtggggatacctgat
ccggatggtatgcggggtgaggtggttcgggtggcggtagtacttcgggatggggttacc
cagacttctgccggtattaagaagtactgtctggataatctggcacagtataaaaccccc
cgggaaatttatattctgaaagatttaccccgtgatttgctgggattgccctgtagagac
agtcttaaacaaatgtaa
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