Dehalococcoides mccartyi DCMB5: dcmb_1038
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Entry
dcmb_1038 CDS
T02476
Name
(GenBank) putative multidrug exporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
dcmb_1038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmd02000
]
dcmb_1038
Transporters [BR:
dmd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
dcmb_1038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA
AAA_21
NTPase_1
SMC_N
TsaE
AAA_30
AAA_14
DUF87
AAA_24
DEAD
ResIII
DO-GTPase2
AAA_16
AAA_18
AAA_5
nSTAND3
Rad17
AAA_7
AAA_23
AAA_29
AAA_28
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGG06639
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Position
994573..996480
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AA seq
635 aa
AA seq
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MSQNRNNPQSRMPVSGGPMGGGMHMGGPMGGMRMAHSGEKARNFKDTMTSLLKYLTPYRF
TLIIALVLAIFGTVFTIIGPKLLGNATTKLFEGLVSKVMNAPGAGIDFTYIGNIVLILVG
LYAVSAICSYIMGYIMTGVSIKVTYDLRKQIAEKINRLPMKFFDNKTYGEVLSHVTNDVD
LISNTLTQSMSQMVTSVVTILGVLVMMFTINWIMALASLIIVPVSIGLISLIVGRSQKYF
RKQQDYLGHINGHVEEMYSAHNVMKAFNGEEKSITKFEGLNEELYGASWKSQFLSSIMMP
MMNFIGNLSYVVVCILGGFLAIQKTIQVGDILAFVQYVRSFTQPLAQTANIVNILQSTAA
AAERIFEFLGEGEEVPEPANPVSLKDISGAVSFKDVSFGYSPTKVIIKNFNADIKPGQRV
AIVGPTGAGKTTMVKLLMRFYDVNSGAILVDGVNIQDIKRQEYRSAFGMVLQDTWLFNGS
IMDNIRFGKLDATDDEVYTAAKTAYIDHFIHTLPNGYEMVMNEESSNISQGQKQLLTIAR
AVLANPKILILDEATSSVDTRTEMLIQQAMENLMQGRTAFIIAHRLSTIRNADIILVMKD
GAIVEQGNHKELLEANGFYASLYNSQFESGLIENN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacagaaataacccccaatcccggatgccggtgagcggcggccctatgggt
ggcggcatgcacatgggcggcccaatgggcggaatgcgtatggcacactcaggtgaaaag
gccagaaattttaaggacaccatgaccagccttttaaaatacctgacaccttatcgcttt
acgcttatcattgcactggtattagccattttcggtacggtctttaccatcatcggcccg
aagcttctgggtaatgcaaccaccaaactttttgaaggtctggtaagtaaagtcatgaac
gctccgggggccggaattgactttacttatataggcaatatagtactgattctggtcggg
ctgtatgcagtcagtgccatatgcagctatattatgggttatataatgaccggcgtatcc
atcaaggttacttatgaccttcgcaagcagatagcagaaaaaataaaccgactgccaatg
aaattctttgacaacaagacctatggcgaagttttaagccatgttaccaacgatgttgat
ttaatatccaataccctaacccaaagcatgtcccagatggttacctctgtagttaccata
ctgggtgtgctggtgatgatgttcactatcaactggattatggcacttgcttcgctgata
atagtccccgtttctataggcctgatttccctgatagtcggccggtcacaaaaatatttc
cgcaaacaacaggactatctggggcatataaacggtcacgttgaagaaatgtattccgcc
cacaatgttatgaaagctttcaacggcgaggaaaaatccataaccaaatttgaagggttg
aacgaagagctgtacggcgcatcatggaaatcccagttcctctccagcattatgatgccc
atgatgaacttcataggcaacctgagctatgtggttgtatgtattctgggcggctttctg
gccatacagaaaaccattcaggtaggcgacatactggctttcgtccagtatgtcaggtca
ttcactcagccgctggcccaaaccgctaacattgtaaatatactccagtctaccgctgcg
gcagccgagcgtatttttgaatttctgggagaaggcgaagaagtccccgaaccggctaat
cctgtcagcctgaaggatatttcaggggctgtcagctttaaagatgtgtcttttggttat
agcccgaccaaagttataatcaaaaatttcaacgcagacataaagcccggccagcgggta
gccattgtcggccctacgggtgccggaaaaaccactatggttaagctactgatgcgcttt
tatgacgtaaacagcggggctattctggtagacggggtaaatatacaggatatcaagaga
caggagtaccgcagtgccttcggtatggtacttcaggatacctggctgtttaacggcagc
attatggataatatccgctttggcaagctggatgcaaccgatgatgaggtttacacagcg
gccaagacggcctacatagaccattttatacataccctgccaaatggttatgaaatggta
atgaacgaggaatccagcaacatctcacagggtcaaaaacagttgctgaccattgccaga
gccgttttggccaaccccaagattttgattttagacgaggctacaagctcggtggatacc
agaaccgaaatgctgatacagcaggctatggaaaacctgatgcaaggccgcacggcattt
ataattgcccaccgtttatccaccatccgtaatgcagatatcatactggtgatgaaagac
ggagcgattgtagaacagggcaaccataaagaactgctggaggctaacggtttttacgct
tcgctatataacagccaatttgaatcaggactgatagaaaataactaa
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