Dehalococcoides mccartyi DCMB5: dcmb_1065
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Entry
dcmb_1065 CDS
T02476
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd00220
Arginine biosynthesis
dmd00240
Pyrimidine metabolism
dmd00250
Alanine, aspartate and glutamate metabolism
dmd01100
Metabolic pathways
dmd01110
Biosynthesis of secondary metabolites
dmd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
dcmb_1065 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
dcmb_1065 (carB)
00220 Arginine biosynthesis
dcmb_1065 (carB)
Enzymes [BR:
dmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
dcmb_1065 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_5
ATP-grasp_4
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AGG06665
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All DBs
Position
1017924..1021163
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AA seq
1079 aa
AA seq
DB search
MNKPKKVLIIGSGPIIIGQAAEFDYAGTQACKAMREEGVESILVNSNPATIMTDENVADR
VYIEPLTVESITKIIEKERPDGLLPTLGGQTGLNLAVDLADAGVLAKYNVRSLGTPINTI
RTAEDRELFKELLTKIGEPVPPSETVTTAEDALRVAHMIGLPVVIRPAYTLGGTGGGFAH
NWDEVEEVAQTGLNASPIHQILVEKSVAGWKEIEYEVMRDGADNCITICNMENFDPMGVH
TGDSIVVVPVQTLTNKESQMLRTASIKIIRALGIEGGCNVQLSLNPNGNEYYVIEVNPRV
SRSSALASKATGYPIARVASKIAIGKRLDEIPNAVTGKTLACFEPAVDYIVAKIPRFPFD
KFALGDRGLGTQMKATGEVMAIDRSFEAAIHKSIRSLEFGKKTVLWEDRSWIMGDDLSTY
PLHAHDTRLWTVLAALRRGHTPEAIHEKTMVDNWFLYKLKNITDMEKRLLKENLTPLLML
EAKQMGFSDEEIATLSGKLAEQVRQTRLEWNIKPVFKMVDTCAAEFDAATPYFYSTYDDE
NEAIPQNVKKAVVIGSGPIRIGQGIEFDYCSVHAAWALEKAGLQSIMINSNPETVSTDFD
TSNRLYFEALDEESVRDILENENISAPESTPSIVQFGGQTAINLAAPLTRSSNPIIGSSA
EAIDLAEDRRRFERLLSEMGIPQAPGAGITSLDEALSIADSIGYPVVVRPSYVLGGRAME
IVSDASDLVRYMSAAIELNTGHPILIDKYLVGKEVEVDAIADGETVFIPGVMEHIERAGV
HSGDSMAVYPTQNLNEHDLATITDYTIRIGKALNVRGLMNIQFVVSKDPEGGDNIVYVLE
VNPRGSRTVPFLSKVTGVPMVDIAVNVMLGKTINEQGYQNGIMPNTDLVAIKAPVFSMAK
LVGVDTYLGPEMKSTGEVMGVDHTFNKALVKTLQAASIMLPETGTLLFSIADRDKAEALP
LIRTLHGLGYNFYATEGTAAMITAAGITVKQISKKLDEGHPNIVDIIRNGTVCGVINTMT
GGRVPLRDGFYIRRAAAERKVPCFTSMDTAKAAVEALANGNRQITVLPLNEYRQGKSGS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacccaagaaagttcttattatcggctccggccccattatcatcggacaggca
gccgaatttgattacgccggtacccaggcctgcaaagccatgcgtgaagaaggggtggaa
tccatactggtaaactccaacccggctactattatgactgacgaaaatgttgcggacagg
gtatatattgaacccttgaccgttgaatctataaccaaaatcattgaaaaagaacggccg
gacggtttgctgcctactctgggcggacaaaccggacttaatctggcggtagatctggca
gacgcaggcgtgcttgccaagtacaacgtgcgttcactgggtacacccataaataccatc
cgcaccgccgaagaccgcgaactttttaaagaattgctgactaaaataggcgaacctgtt
cctccttcggaaactgtgactacagccgaagacgcactccgtgttgcccatatgataggc
ctgccggtggtaatacgcccggcctatacccttggcggcaccggcggcgggttcgcccat
aactgggatgaagttgaggaagtggctcaaacaggcttgaatgcctcacccatccaccag
atactggtggaaaagtcggttgccggctggaaagaaattgaatatgaagtaatgcgtgac
ggggcagacaactgcataactatctgcaatatggaaaactttgacccgatgggggtgcat
accggagacagcattgtagttgtgcccgtccagacccttaccaacaaagagtcccagatg
ctccgcaccgcttccatcaagataatacgggcattgggtattgaaggcggctgtaacgta
caactttctctaaacccgaatggcaacgaatattatgtaattgaggttaatcccagagta
tcccgttcatcagccctagccagcaaggccaccggttaccccattgcccgggtggcttcc
aagatagccattggcaaacggctggatgagataccaaacgccgttaccggcaaaactctg
gcctgttttgagcctgccgtagactatattgtagctaaaatcccccgcttcccctttgac
aaatttgcacttggagaccggggcttgggcacgcagatgaaagccaccggggaagtcatg
gccattgaccgcagttttgaagcggctatccacaaatccatccgctctctagagttcggc
aagaaaaccgtactctgggaagaccgtagctggataatgggagatgacctttccacctat
ccccttcatgcccatgatacccgcttgtggacagtactggccgctctccgccgcgggcat
acacccgaagctatccatgaaaaaacaatggtagataactggtttttatacaaactgaaa
aatattaccgacatggaaaaacgcctgcttaaggaaaatctgacccccctgcttatgctt
gaagccaaacaaatgggtttttcagatgaagaaatagccaccctgtcaggcaaactggcc
gaacaggtcaggcagacaaggctggaatggaatataaaaccggtattcaaaatggtggac
acctgtgccgccgaatttgatgccgccactccatatttctactccacctatgacgatgaa
aatgaagctatcccccagaatgttaaaaaagcagtggttataggttcgggccctatccgt
ataggacagggaatagagtttgactactgctcggtgcatgccgcttgggctttagaaaag
gccggtttgcagagcattatgataaactccaaccccgaaacggtctcaacagattttgat
acctcaaaccgtctgtattttgaagctctggacgaagaaagtgttcgggatattctggaa
aatgaaaacatatccgcacccgaatctactcccagcattgtccagttcggcgggcagacg
gctataaacttggctgctccccttacccgaagcagcaatcccatcatcggttcatcagcc
gaggctatagatctggccgaagaccgccgccgttttgaacgcctgctatccgagatgggc
attcctcaagcaccgggggctggcataaccagtctggacgaggctctcagcatagccgac
agtattggctacccggtggtagtccgcccaagttacgtactaggtggacgggctatggaa
atagtcagtgatgcatccgaccttgtacgctacatgagcgccgccatagagctgaatacc
ggacaccccatactgatagataaatatctggtgggcaaggaagtggaagtagacgccatt
gcagacggggaaaccgtgtttatccccggcgttatggagcatattgaacgggcaggcgtc
catagcggagactccatggcagtttaccccacccaaaacctgaatgaacatgatttggcg
accattacagactatactattcgcatcggcaaagccctgaacgtacgcgggcttatgaat
atccagtttgtagtctccaaagaccccgaagggggagataatatagtatatgtactggag
gtaaatcccagaggctcacgcactgtccctttcctctcaaaagtaacgggcgtacccatg
gtggacatagctgtaaacgttatgctgggtaaaactataaacgaacagggctatcaaaac
ggcattatgcccaatacggatttggtagccataaaagcccctgtcttctccatggcaaag
ctggtgggggtggatacctaccttgggccggaaatgaaatccaccggtgaagtaatggga
gtagaccacaccttcaataaagctctggtaaaaaccttgcaggcggcatctataatgctg
cccgaaacaggcactctcctattcagcatagctgaccgtgacaaggccgaagccctgccc
cttatccgtaccctgcatgggctgggatataatttctatgctaccgaaggcactgccgcc
atgataaccgccgccggtataacagttaagcagataagcaagaaactggacgagggtcac
cccaatattgtggatattatccgtaacggcacagtctgcggagtgataaataccatgacc
ggtggcagagtacccctgcgggacggtttttatatccgccgggcagccgccgaacgcaaa
gtgccttgctttacctctatggataccgccaaagccgctgtggaagccctggcaaacggc
aaccgccagataacagtcttgcccttaaatgaataccgccagggcaaaagcggcagttag
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