Dehalococcoides mccartyi DCMB5: dcmb_1082
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Entry
dcmb_1082 CDS
T02476
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
dcmb_1082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmd03400
]
dcmb_1082
DNA repair and recombination proteins [BR:
dmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
dcmb_1082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
ABC_tran
AAA_14
AAA_22
zf-C2H2_5
Motif
Other DBs
NCBI-ProteinID:
AGG06682
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Position
1039324..1041900
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AA seq
858 aa
AA seq
DB search
MENTTPLRKQYLDIKKNYPEAIVFFRLGDFYETFEEDARIAARELEIVLTSREMGKGLKV
PLAGIPYHALDNYLSRLINKGYKVAICEQVTKPGETKGLVQRQVTRLVTPGTVVEPNLLQ
TKQNNFLLSLYLTEDSCGLAFADISTSEFGCTQTNISELEAEISRLSPAEIILPKNQSLN
LPIHLKATISKLDGYYFEADIARERLLRHFECQNLSAYGCENMPLAISAAGALLNYLEET
QKSSLKQLERLSVYTTADYMQMDSHTLSNLEIFRSSGGNSLKGSLLGILDQTKTAMGGRL
LRKFLGQPLLKQSDIEKRLSAVDYFFEESLARTSLAKSLGQIADMERMANRIRQKTILPR
ELISLKNSLETVSAIHRQFGLMPPPRLAYFLNGLKPLPEMLDIINKTITDDPPSTLGDGK
VIRAGFDPEMDKLCSLAGDARTFLSQMETRERERTGIKSLKLGYNRVFGYYIEISNANLG
DVPPEFIRKQTLVNAERFITPELKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSALL
ANAAALAALDVLSAFAEVAVRNSYVRPVFHPENRLDIRKGRHPMVEQGLGYGSFVANDIS
LSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGARE
DLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQPSL
TAKTLFATHYHELVELASYLPRVTNYNIAVSEDRGEVVFLHKIVPGGVDKSYGIHVAKLA
GLPKWVIKRAYEVLTELENPAKKQPKSRTCQSQLQLPMTGQTSVLEEEIKELEIESLTPL
AALNKLYELKKKAEEQGL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacaacacccctgcgtaaacaatatctggatataaaaaagaactaccccgaa
gcgatagtctttttccgtttgggagatttttacgaaacttttgaagaagatgcccgcatt
gccgcccgcgaactggaaatagtccttaccagccgcgaaatgggcaaagggctgaaagtg
ccgcttgccggcataccttaccacgcactggacaactatctttcccgccttataaacaag
ggttacaaggtagccatttgcgaacaggtaaccaaaccgggtgaaacaaaaggactggtg
caaaggcaggtaacccgtctggtcactcccggaactgtggttgaaccaaacctgctacag
accaaacagaacaatttcctgctcagcctgtacctgacagaagacagttgcgggctggcc
tttgcggatatatccacttcggagtttggctgcacccagacgaatatcagcgaactggaa
gctgaaataagccgcctcagtccggcagaaattatactacccaaaaaccagtctttaaac
ctgccgatacacctgaaagctaccataagcaaactggacggatactattttgaagcggac
atagcgcgcgaacgtttgctaaggcattttgagtgccaaaacctttctgcctacggctgt
gaaaatatgcctctggccatttcagccgccggggcgctgctaaactatctggaggaaact
caaaaatcatctttaaagcagcttgaaaggctttcggtttacaccactgcagattatatg
cagatggacagccacaccctgtcaaatctggaaatattccgctcaagcggcggcaactca
ctcaagggttcactgcttgggatacttgaccagaccaaaacagctatgggtggcaggctt
ctccgcaagtttctgggacaacccctgctgaaacagtctgatattgaaaaacggctctcg
gcagtagactacttttttgaagaaagtctggcacgtaccagccttgccaaatcattgggg
cagattgccgatatggaacgcatggcaaaccgtatccgccagaaaaccatactgccaagg
gaactgatatcccttaaaaacagtctggaaaccgtctccgccattcaccgccagttcggg
ctgatgccgccgccccgccttgcatatttcttaaacgggcttaaacccctgcctgaaatg
ctggacattataaacaaaactattacggatgacccgccctccactctgggtgacggaaag
gtaatacgagcaggttttgaccccgaaatggataaactctgctcgctggcgggagatgcc
agaaccttcctctcccaaatggagactagggaacgggaacgcacaggcataaaatcactt
aagctgggctataaccgggtctttggttattatatagaaatatcaaacgccaatcttggg
gatgtgccgccggaatttatccgcaagcaaacgctggttaatgccgaaagatttataacc
cccgaactgaaagaatacgaaaatcttatcttaaatgccaaagaacgcctgctggaaatg
gaaacagggctttatgaacaggttttaaaccaactggggggcttttactccgctttactg
gccaatgccgccgctttggcagctctggatgttctttcagcctttgccgaggtggcagtg
cgaaacagctatgtccgtccggtattccaccctgaaaaccgcctggatatccgaaaaggc
cgccaccccatggtggaacaggggctgggatacggcagttttgtagctaatgatatttcc
ctttcagctgaagactgccagataataatcctgaccggacccaatatggccggcaaatcc
acttatttaaagcagaccgcccttattgtgctgatggcccagataggttcttacgttccg
gcagaaaccgccgaactctgcctgactgatcgtatttttacccgcatcggggcaagagag
gatttaagtgccgggcagtccaccttcatggtggaaatggtggaaacggcatctatactg
aatactgccaccagccgttccctgctgatactggacgaaataggccgcggcaccagtacc
tatgacgggctggctattgcccaagcagtagtggagtatatccactcccagccatctctt
acggccaaaaccctgtttgccacccactatcacgaactggtagaactggcaagctatctg
cccagagtaacaaactataatattgcggttagcgaagaccggggtgaagtagtttttctg
cataaaatagtccccggcggagtagacaaaagttacggtattcacgtggcaaaactggca
gggctgcccaagtgggttataaaacgggcttacgaagtactgaccgagcttgaaaacccc
gctaagaaacagccaaaaagccgcacttgccagtcccaactccaactacccatgacgggg
cagacttcggtgcttgaagaagaaataaaagaactggaaatagagtcgcttacgccgctt
gcggctctcaacaaactctacgaactgaaaaagaaggccgaagaacaggggctttag
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