Dehalococcoides mccartyi DCMB5: dcmb_1239
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Entry
dcmb_1239 CDS
T02476
Name
(GenBank) diguanylate cyclase and metal-dependent phosphohydrolase
Organism
dmd
Dehalococcoides mccartyi DCMB5
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
HD_5
HD
HisKA_7TM
GAF_2
GAF_3
GAF
HDOD
Motif
Other DBs
NCBI-ProteinID:
AGG06838
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Position
1170379..1172904
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AA seq
841 aa
AA seq
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MTIWALVPLVTSIAYLVLLAVVLLSKRQSITRVFSVFLGAAAFWSFTSFMLHIDAPPEQT
LIRHNLLNIALFAAMLMYYQFIRAYTNRRGKLFLIIGYIALALDIFLNLTGQLVTSAYIE
DNVVYHTITPVFYSVFILALSFIGVIIYHLVQKYRQSTDPAERNRTLYLVLGWVIVVLSS
YTNLSDNPRIYGLPLDHVGNFINAGIIVYAITQYRLIDIKLIARKTLTYVLLFFSMITVY
AGAIFIATRIFPAEEMSTIILMATLIVLILAMTAHPLRTFIEKRIDRLFYQETYESRLAL
MGFSRKMGNILNLEELAKSLLPDLAKSLNINKAALLFPDVASGEFSMEYIYPADDHLKTQ
FKLAADNPVISWLDKNNAQLYLNKLDNLPELKGLWQIEKEQLQKSEMGLLYPIKSRDKLI
GIIGLGNKKRGGIYSTEDLDMLISVANQAGVIIENAQLYTQATIRANTDELTRLYNHRHF
HERIEQEIARGSRFGNTFSLILLDLDLFKVYNDVYGHLAGDQLLRRLGKILENSIRSIDM
AFRYGGEEFAIMLPGTKIEDAYHVAERIRKNIESKSSFRDMPITASLGLANWPTDGVMKE
EIIAKADAALYRSKETGRNRTSLPADLNNNSTQIISSELEARPKAMSIIYALAATVDAKD
HYTYGHSRKVSEYAVALAEILKLSEEKVETIRAAGLLHDIGKIGVPDHILTKPSALDDEE
WEPIKTHPELGVEILKRIMDLVNCLPAILHHHEHFDGSGYPFGLKGENIPLEARILSIAD
AYDAVTSPRPYRTQLHTEQAVAELKRCAGSQFDPELVDIFCHVIKPEDSPQLKASPETGT
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
gtgactatctgggctctggtaccgcttgtaaccagtattgcatatttagtgctgctggcg
gttgttctgctttcaaaacggcagtctatcaccagagttttttccgtgtttttaggtgcc
gctgctttctggagtttcacctctttcatgctccatattgatgccccgccggagcaaacc
ctgatccggcacaacctgctgaatattgccctgtttgccgccatgcttatgtactaccag
tttatccgcgcctataccaaccgcagaggcaaactttttctgataataggttacatagca
ctggcgctggatattttccttaacctgaccggacagctggtcacatccgcctacatagag
gacaatgttgtttaccacacaataactccggtgttttattctgtttttatacttgcttta
tcattcatcggggtaattatttaccacttagtccagaaatatcgtcaatctacagaccca
gctgaacgcaaccgcacactgtatttggtactgggatgggtaatagtagtcctttcaagc
tataccaatcttagcgacaacccccgtatctacggccttccccttgaccatgtgggcaac
tttataaatgcggggattatcgtttacgctatcacccagtaccgtttgattgatatcaaa
ctgatagcccgcaaaacccttacttacgtccttctgttcttctccatgataactgtatat
gcaggagctatatttatagctacgcggatattccctgccgaagaaatgtctactatcatc
cttatggcaaccctgattgtactgatactggccatgacagcccacccgttgagaacattt
attgaaaagcgcatagaccgtctgttttaccaggaaacctatgaatcccgtctggccctc
atgggcttttcccgcaagatgggcaatatacttaatctggaggaactggccaaatcgctg
ttacctgatctggctaagtctttaaatataaataaagccgcactgcttttccctgatgtt
gccagcggcgaattctctatggagtacatctaccccgcagatgaccaccttaaaacccag
ttcaaattggcggcggacaaccccgttatttcctggctggataaaaataacgcccagctt
tatctgaataaactggacaatctgcctgaactgaaaggcttatggcagatagaaaaagag
caactccaaaaatcagagatggggttgttgtatcccattaaaagccgcgacaaacttata
ggtattatcgggctgggaaacaagaagcgggggggtatatattctaccgaggatttggat
atgctgataagtgtggctaatcaggctggtgttattatagaaaatgcccagctctacact
caggccactatccgcgccaataccgatgaacttacccgcctgtataatcaccgccacttc
catgagcgcatagaacaggaaatagcccgcggttcacgctttggcaataccttttccctg
atactgctggaccttgacctgtttaaggtctacaacgacgtatacggccatctggcaggt
gaccaactgctacgcagactgggtaaaatactggaaaactccatccgctctatcgacatg
gctttccgctatggcggtgaggaatttgccataatgctacccggcaccaagattgaagac
gcttaccatgtagccgaacgtatccgaaagaatattgagtctaaatcttcttttcgtgac
atgccgataactgcttctctgggtctggctaactggccgactgacggggtaatgaaagag
gagattatagccaaggctgatgccgccctgtaccgttcaaaggaaaccggacgaaaccgc
accagcctgcctgctgacctgaataataactccacccagataatcagctctgaattggaa
gcccgccccaaagccatgtccattatctatgctctggcggccacggttgacgccaaagat
cactatacttacgggcattcccgcaaggttagtgaatatgcggtggctctggcagagata
ttgaagctctctgaggaaaaagtggaaactatacgggcagccggactattgcacgatatc
ggcaagataggcgtacctgaccatatcctgacaaaaccctccgctctggacgatgaagaa
tgggaacctatcaagacccacccggaactgggagtggagatattaaaacgtatcatggat
ctggttaactgccttccggctatactccatcaccatgaacactttgacggcagcgggtat
ccttttggactgaagggtgaaaacatacctctggaagccagaatactcagcatagcagat
gcctatgatgcggttacttcaccccgcccctatcgcacccagcttcacactgagcaagcg
gtagccgaactgaaacgttgtgccggctcccagtttgaccctgagctggtagatatcttc
tgccatgttattaagcctgaagattccccgcagctaaaagcctcacctgaaaccggcact
gaataa
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