Dehalococcoides mccartyi DCMB5: dcmb_1271
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Entry
dcmb_1271 CDS
T02476
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
dmd
Dehalococcoides mccartyi DCMB5
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dmd03110
]
dcmb_1271
Chaperones and folding catalysts [BR:
dmd03110
]
Heat shock proteins
HSP100
dcmb_1271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
TniB
AAA_14
ATPase_2
NACHT
AAA_7
ResIII
IstB_IS21
AAA_25
T2SSE
NB-ARC
AAA_3
NBD_SMAX1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AGG06869
LinkDB
All DBs
Position
1205121..1207559
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AA seq
812 aa
AA seq
DB search
MRQEKFTEQAQEALSASQMLVQEYQHSQWDVEHVLLALVRQEKGLVGEIIKELKLSSEEI
TKQLVEALKRSPKAVGGNVQIYPTPRIISLLQTANNEADRLRDEFIGTEHLLVAIAGDTQ
GESARILKHFGIDQEKVYSALQKIRGGHRVTDARAESKYRALAKYSRDLTELAKQGKIDP
VIGRDQEIRRVMQILSRRTKNNPVIVGEAGVGKTAIAEGVAQKIADNDVPESLRDRKVMA
LDMGALVAGSKFRGEFEERLKAVMDEVRQSAGEIILFIDEIHTVVGAGAAEGAIDASNML
KPALSRGELQTIGATTLDDYRKYIEKDTALERRFQPVYVEEPTVEQTIEILKGIRPKYET
HHKLKISDAALEAAVRLSSRYITERQLPDKAIDLIDEAASKLRLDSESAPPEVKKLENEF
RQAGIEEEAASQLQDYEKAAELKAEKIRLEEKFNTAREEWLKQEKIAEEVTDKQITELVS
SMTGIPVSQMLEGEASKLLNMEERIHERMVDQEEAVKAVAEAIRRSRAGLKDPRRPIGSF
LFLGPTGVGKTELARSLAWFLFDDETAMVRLDMSEYQEKHTVSRLVGAPPGYVGYDEGGQ
LTELVRRRPYRVILLDEIEKAHPDVYNSLLQLLDDGRLTDGQGRTVDFKNTVIIMTSNAG
IETIKRESALGFAVRTDDTKTRHDSYERMKDKVMTEVKKTFRPEFINRVDEIIVFHELAE
EQIRQIVDFMIKDVSKRLEERKLKLELTDEAKGWLAKVGYDPAFGARPLRRAIERYVESP
LAGKLLRNEFSENATILVDKADEALSFSQKAA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggaaaaatttaccgaacaagcccaggaagccctcagcgcttcacagatgctg
gtacaggaatatcagcacagccaatgggatgttgaacatgtactgctggctcttgtccgt
caggaaaaagggctggtgggtgaaataatcaaagagctgaaactaagctccgaggaaata
accaaacagctggtagaggctttgaaacgttcgcctaaagcagtaggcggcaatgttcag
atataccccaccccccgcattatcagcctgctgcaaaccgccaacaacgaagcagaccgc
ctgcgggatgaattcataggcacggaacatctgctggtagctatagcaggagatacccag
ggagaatctgcccgcatcctgaagcattttggtattgatcaggaaaaagtctattccgcc
ctccagaaaataaggggcggacaccgggtgactgatgccagagccgaaagcaaatacagg
gcactggccaaatacagccgtgaccttaccgaactggctaaacagggcaagatagacccg
gtaataggccgtgatcaggaaatccgccgggttatgcagatactctcccgccgcaccaag
aacaaccctgtgatagtgggtgaagcaggtgtaggcaaaactgccattgccgaaggggtt
gcccaaaaaattgcggataacgacgtacccgaatccctgcgtgaccgcaaggtaatggca
ctggatatgggtgcattggttgccggaagcaagttccggggggagtttgaagaacgcctc
aaagccgtaatggacgaagtgcgccaatctgccggtgaaattattttgtttatagatgaa
atccataccgtagtcggggcaggggcagccgagggggctattgatgcctcaaacatgctg
aagccggccttatccaggggtgaactccagactattggggctaccactctggatgactac
cgcaaatatattgaaaaagacaccgctctggagcgccgcttccagccggtatatgtggaa
gaacctacagtggaacaaactattgagatactaaagggtatcagacccaagtacgaaacc
caccacaagctgaagataagtgacgccgctctggaggcagccgtcaggctgtccagccgt
tacataactgaacgccaactgcccgataaggctatagaccttattgacgaagccgcaagc
aaactccgtctggatagcgaaagcgccccgccggaagtaaagaagctggaaaatgaattt
cgtcaggcaggcattgaggaagaagccgcttcccaactgcaggattatgaaaaagcggct
gaactcaaggctgaaaaaatacgcttggaagaaaagttcaacactgcccgtgaggaatgg
ctgaaacaggagaaaatagccgaagaagtaactgacaaacagataaccgagctggtttcc
tctatgaccggcatacctgtcagccagatgcttgaaggcgaggcttccaaactgctgaat
atggaagagcgtatccacgagcggatggtagaccaggaagaagctgtaaaagccgttgcc
gaagctatccgccgcagcagggcaggtctcaaagacccgcgccgccctataggcagtttc
ctgtttttaggcccgaccggggtgggcaaaacagaactggcccgaagtctggcctggttt
ttgtttgacgatgaaaccgccatggtaaggctggatatgtccgaatatcaggaaaagcac
accgtatcccgtctggtgggggcacctcccggatatgtgggctacgatgaaggcgggcaa
ctaaccgaattggttcgccgccgcccttatcgggttatcctgctggatgaaattgaaaaa
gcccatccagatgtctacaattccttgctccagctactggatgacggccgtctgacagac
gggcagggcagaacagtggactttaaaaatacggtcattataatgacctctaacgcaggc
atagaaaccataaaacgcgaatctgctctgggtttcgcagtcagaaccgatgacaccaaa
acccgccatgacagctatgaacgcatgaaagacaaggtcatgaccgaagtcaaaaagacc
ttccgcccggagttcatcaaccgggtagatgaaataattgtcttccacgagctggcagag
gaacagatacgccagatagtagatttcatgataaaagacgtttccaaacgtcttgaggaa
cgcaaactcaaactggagctgaccgacgaggctaagggctggctggccaaggtgggttat
gacccggctttcggtgccagaccacttcgcagagccattgaaagatacgtggaaagcccg
ctggcgggcaagctgcttcgcaatgagtttagtgaaaatgctacaatactggtggacaag
gcggatgaagctttgagttttagccaaaaggccgcctga
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