Dehalococcoides mccartyi DCMB5: dcmb_1345
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Entry
dcmb_1345 CDS
T02476
Symbol
appD
Name
(GenBank) 5-6 amino acyl oligopeptide transporter AppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
dcmb_1345 (appD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmd02000
]
dcmb_1345 (appD)
Transporters [BR:
dmd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
dcmb_1345 (appD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_7
AAA_22
AAA_RNF213_3
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AGG06935
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All DBs
Position
complement(1264628..1265596)
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AA seq
322 aa
AA seq
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MKNLLVVSNLHVYFETPAGLVRANNGLNLHLEEGCNLGIMGESGCGKTVLVYTLLGLQQP
GKIITGSILFSGRELVNLPEAELNHIRGRQIALIPQNQSTALNPLLKVGEQIGEVCVNLN
RPDIRLEGARKLLSDLGLGDIHSVEHILKSYPHQLSGGMRQRVLTAMALLSEPDLLVADE
PTTALDANTRTTTLNILKEASKRTSLLVISHDLPALKTLCPKLGVMYAGRIVEYGDTLSL
MSNPLHPYSRLLMKCQQAGDYIDIPLTGFESRDLLGDNEGCSFAPFCPQATGICFKELPP
EVCLDNSRVVCHLYTQSGMKLC
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctgctggtagtttccaacctgcacgtttattttgagactcctgccggtctg
gtgcgggctaacaatgggttgaatctgcaccttgaagagggttgtaatctgggtattatg
ggggagagcggctgcggcaagactgtacttgtctataccctgctggggctgcagcaaccc
ggtaaaattataaccggcagtatacttttcagcggcagagagctggtaaatctgcccgaa
gctgagctgaaccatataaggggcaggcagattgcccttatccctcaaaaccagtctacc
gctctcaatccccttttaaaggtgggtgaacagataggcgaggtttgcgtgaatctgaac
aggcctgacataaggctggagggggctagaaagttactttcggatttgggattgggtgat
attcattcggttgaacatattttaaaaagctatccccaccagctgtccgggggtatgcgc
caaagagtgctgacggccatggcgcttctttcagagccggatttactggtggcagacgaa
cctactaccgcacttgatgctaatacccgtaccaccaccctgaatatactgaaagaggca
tccaaaagaaccagcctgctggttatcagccatgacttacctgctctgaaaaccctctgc
ccaaagctgggggtaatgtatgccgggaggattgtggagtatggtgataccttaagcctg
atgtcaaacccccttcacccttacagccgcctgcttatgaaatgccagcaagccggagat
tatattgatatacctttgacaggttttgaaagccgggatttactgggagataatgaaggt
tgtagtttcgccccgttctgtccacaggcaaccgggatttgttttaaagaattaccccct
gaagtttgtctggacaacagcagagtggtttgccatctttatacccaaagcgggatgaag
ctgtgttaa
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