Dehalococcoides mccartyi DCMB5: dcmb_143
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Entry
dcmb_143 CDS
T02476
Symbol
pycB
Name
(GenBank) pyruvate carboxyl transferase subunit B
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd00020
Citrate cycle (TCA cycle)
dmd00620
Pyruvate metabolism
dmd00720
Other carbon fixation pathways
dmd01100
Metabolic pathways
dmd01120
Microbial metabolism in diverse environments
dmd01200
Carbon metabolism
dmd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
dcmb_143 (pycB)
00620 Pyruvate metabolism
dcmb_143 (pycB)
09102 Energy metabolism
00720 Other carbon fixation pathways
dcmb_143 (pycB)
Enzymes [BR:
dmd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
dcmb_143 (pycB)
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
HlyD_3
Biotin_lipoyl_2
RnfC_N
GCV_H
NQRA_N
DUF2118
HlyD_D23
DUF561
Peptidase_M23
PTS_EIIA_1
ATP-synt_ab_Xtn
Motif
Other DBs
NCBI-ProteinID:
AGG05776
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Position
154422..156170
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AA seq
582 aa
AA seq
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MGIKITDTTLRDAHQSLIATRMRTRDMIDIAARLDKAGFHSLEVWGGATFDSCIRFLNED
PWERLRLIRQKAPNTPLQMLLRGQNLVGYRHYADDVVREFVRLSVKNGINIFRVFDALND
IRNMEVSIQTAKELKAHVQGTICYTTSPIHTVEKLAEMAVELEKMGCDSICIKDMAGLIT
PTAAAQLVKSIKAKVKLPVDLHSHCTSGMAPLAYYAAAEAGVDIIDTAFSAFAWGTSQPT
TESFVAAFKGTKLDTGLDLELMSEIGEEFNKISASYRCLYTCEATQPSISVLLHQIPGGM
ISNLVSQLRQQNAFDKLSEVLAEVPRVRADLGYPPLVTPSSQIVGTQAILNVLSGERYKQ
VTKETKNYLMGYYGKIPGKVNEDIRKAIIGDEKPISVRPGALLEPELPKMKAEGEKLGIL
KTEEDLLTYAMYPEVAAKFLKGECKEECLLPSTPEAAKPVKTEAKPVPAFSGSAEYSVEV
DGEVFTVKVSAKAGVAGEAPKALKPTASHPGAIVSPMQGMLLSLKVKEGDKVTEGEVVAT
IEAMKMENDVCATVNGVVVEIYAYEGEVVGSKDVIMVIEPDA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgggtataaagattacagataccactctgcgggatgcgcaccagtcactgatagctacc
cgaatgcgtacccgtgacatgattgatattgccgcccggctggataaggccggctttcac
tcgctggaggtctggggcggtgctacttttgactcctgtatccgctttctgaacgaagac
ccgtgggaacgcctccgcctgatacgccaaaaagctcccaacacccctctccagatgctt
ctcagagggcagaatctggtgggataccgccattatgcagacgacgtggtacgtgaattt
gtccgtttgtcagttaaaaacgggataaatattttccgggtttttgatgcgctgaatgat
atccgcaatatggaagtttccattcagactgctaaagagcttaaagcccatgttcagggg
actatctgctataccaccagccccattcacaccgtggagaagctggccgaaatggcagtg
gagctggaaaagatgggttgtgattccatatgtattaaagacatggccgggcttattact
cccaccgccgccgcccagctggtcaagtccataaaagccaaggtcaaactgccggtagac
ctgcattcacattgtaccagcggaatggcacccttagcttattatgcagcggctgaggcc
ggggtggatataatagataccgccttctccgcttttgcctggggtacttcccagcccacc
accgaaagttttgtggccgcttttaagggtacgaaactggataccgggcttgatctggaa
cttatgagtgaaataggtgaggaatttaacaaaataagtgcctcttatcgttgcctttat
acctgcgaagccacccagccgagtatcagcgtgctccttcaccagatacccggcggcatg
atatcaaacctggtcagccagcttcgccagcaaaatgcctttgacaaactgtcagaggta
ctggctgaagtgcccagagtcagggctgatttgggttatcccccattagttaccccgtca
agccagattgtgggtactcaggctattttaaatgtgctgagcggcgaacgctataaacag
gtgaccaaagagaccaaaaactatctcatgggatattacggcaagatacccggtaaagta
aacgaagatatccgcaaggctattataggggatgaaaaacccatcagcgtcaggccgggg
gctttgctggaaccagaactgcccaagatgaaagccgaaggcgaaaagctgggtatactc
aaaaccgaagaagaccttttgacttatgccatgtatccggaggtagccgccaagttcctc
aagggtgagtgcaaggaagagtgccttctgccgtctacacctgaggcagccaaaccggtc
aagactgaagcgaagcctgtacctgcctttagtggttcggctgaatacagtgttgaggtg
gatggagaggtctttacagtcaaggtttctgccaaggctggagttgctggggaagcccct
aaagcgctcaaacctactgcctctcatccaggagctattgtctcccccatgcagggtatg
ctcctttcgctaaaggtgaaggaaggggataaggtaaccgagggtgaagtggtagccacc
attgaggctatgaaaatggaaaatgatgtctgtgccactgtaaacggggtggttgtggaa
atatatgcctatgaaggcgaagtagtgggcagcaaagacgttatcatggtgatagagcca
gatgcttaa
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