Dehalococcoides mccartyi DCMB5: dcmb_191
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Entry
dcmb_191 CDS
T02476
Name
(GenBank) formate dehydrogenase-like protein, catalytic subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd00630
Glyoxylate and dicarboxylate metabolism
dmd00680
Methane metabolism
dmd01100
Metabolic pathways
dmd01120
Microbial metabolism in diverse environments
dmd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
dcmb_191
09102 Energy metabolism
00680 Methane metabolism
dcmb_191
Enzymes [BR:
dmd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
dcmb_191
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AGG05822
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All DBs
Position
complement(200571..203552)
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AA seq
993 aa
AA seq
DB search
MRSQFSRRDFLKISGGTAGLFATAGLFRGPIKGVEPKMVDTRPRWVKETTTICPFDASGC
GFICYTDSAGNLTNMEGDPDNPVNRGSACSKGASLIQLHNNKHRLEKVLYRAAGANDWEE
KSWDWAFGEIAKKVKASRDSGFIAKNAAGKTVNRTEAIASLGGATLDNEECYLLSKMLRA
LGIVYLDSQARLSTASSLEALAASFGRNAMTNSWTDVSNANVILDMGGNPAENYPACFSH
LGEAMGKGAELISVDCRLTRTAAKAGTFVAARSGSEIAFIGGLIKYVISDIEAHPANYNL
TYITEYTTAGMVVNSNFKGPADLDGMFVGYNTASHSYDQSNWNFTKASNGEPVIDKTLTN
PNCVFQLLKKQYARYTPEMVSATCGCSQADFAKVCAFFAATGKADKAGAIVYAMSSTQHT
SGAQTVRAYAVLQMLLANIGVSGGGLFALGGESNVQGAADNGVSWNKLPGYLSAPNEDDT
TFAAYASKAGDQSAASLLKAWYGSNASSSNGFGFGFLPKTDNNTNYSYVNAIKQMAAGKI
KGAFAWGANPVVESAAAGQATQALAKLDWLVVTDMFESETAAFWKKDGVTSQTEVFLLPT
ACSYEKEGSVTNADRWIQWRNKAVSASGEAKSELEVISSLLSRLQTLYQGESGLNAEAIT
KLSWTYSTNPSAADVAKEMNGYKISSLQQLESPEDLRADGTVACGNSLYIGSFTNAGNQM
ARREQTGAFHAGWAWSWPMNTRIMNNRASVDLSGKPFNAAKPVISWNGMSWTGDNVDGKN
APFNQSGGLPFKGTNGNTAQLFAAMADGPMPEHYEPWESPVDNALSGTQNNPTAMVFEGD
TQGSAGEYPVICTTIRTVEHSLGGQLTRNMPFLVELAPAAYVEISEQLASEKGIKAGDIV
KLTSARGSVSVAAAVTKRLKPFSIGGKTVHQVAIPNHWGFMGIAQGDSANVLAPNTADSN
SSTPEFKAFLVKVEKAADGTVPTITGRYKVLED
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctcagtttagtaggcgagatttcctcaagatcagcggagggaccgcgggtctc
tttgccacagctggtcttttccgtggacccattaagggtgttgagcccaaaatggttgac
acgcgcccccggtgggtaaaagaaaccaccaccatttgtccctttgatgccagcggttgc
ggatttatctgctataccgattcggccggcaacctcaccaatatggaaggtgatccagac
aatcccgtaaatcgggggagtgcctgttccaagggtgcttcgctgattcaacttcacaat
aataaacaccgtttagaaaaggtgctttaccgtgccgccggtgcgaatgattgggaagaa
aagtcatgggattgggcgtttggtgaaattgccaaaaaggtaaaggccagccgtgacagc
ggttttatagccaaaaatgctgccggcaagaccgttaaccgcaccgaggctattgcctcg
ctgggcggagctactctggataacgaagaatgttatcttctgtccaagatgcttcgtgcc
ctgggcattgtctacctggatagccaggccagactgagcaccgcttccagcctggaagct
ttggcggcttcgttcggacgaaacgccatgaccaacagctggaccgatgtttcaaacgcc
aacgtcattctggatatgggtggcaacccggctgaaaactaccctgcctgtttctcccat
ctgggcgaagctatgggcaaaggtgcagagcttatcagcgttgactgccgcctgacccgg
actgccgccaaggccggcacattcgttgccgcccgctccggttcggagattgcctttatc
ggcgggcttatcaaatatgtcatttctgacattgaagctcaccccgcaaattacaacctg
acctatattaccgaatacaccactgccggcatggtagtaaactccaacttcaagggtccg
gctgatttggacggcatgtttgtaggttacaacaccgccagccattcatacgaccagtca
aactggaactttaccaaggccagcaacggcgaaccggtaatagacaaaacccttaccaac
cccaattgtgtcttccagcttttgaagaagcaatatgcccgttacactccggaaatggtg
tccgcaacctgtggctgctcccaggctgactttgcaaaggtctgtgccttttttgccgca
accggcaaagcagacaaggccggcgctattgtctacgccatgagctccacccagcacacc
tccggcgctcagacagttcgggcttatgccgtacttcagatgctgctggccaatatcggc
gtatccggcggcggtttattcgcccttggaggtgaatctaacgtacagggtgctgccgac
aacggtgtctcatggaacaaactgcccggttatttatctgcccccaacgaagacgatacc
acttttgccgcctatgcttctaaagccggcgaccaaagtgcagccagccttttgaaggcc
tggtacggctctaatgcctccagctcaaacggtttcggcttcggcttcctgcccaaaaca
gataataataccaattactcttacgtaaacgctatcaaacagatggctgccggcaaaata
aagggtgctttcgcctggggtgcaaacccggtggttgagagtgctgctgccggtcaggct
actcaggctttggccaaactggactggctggtagtgacagatatgtttgagtctgaaact
gctgctttctggaagaaagacggggtgacttcgcagaccgaagtcttcctgctgcccact
gcctgttcttacgaaaaagaaggcagtgtaaccaatgctgaccgctggattcaatggcga
aacaaggccgtcagcgcttccggtgaagccaaatctgagcttgaggttatcagctccctg
cttagccgtcttcagaccctttatcagggcgaaagcggcctcaatgcagaagctattacc
aaactcagctggacttacagcaccaacccctctgcggctgatgtagccaaagagatgaac
ggatacaagatatcttccctgcagcagcttgaaagtcctgaagacctaagggctgacgga
acagttgcctgcggcaatagcctttatatcggcagctttacaaatgccggaaaccaaatg
gcacggcgtgaacagaccggtgctttccatgccggttgggcttggagctggccgatgaat
acccgcataatgaacaaccgcgcttcagttgacctcagcggcaagcccttcaatgcggcc
aaacccgttatcagctggaacggtatgagctggaccggtgacaatgttgacggtaaaaac
gctccgtttaatcagagcggcggactgccctttaaaggtaccaatggcaataccgcacag
ctctttgccgccatggctgacggccccatgcctgaacattacgaaccttgggaaagcccg
gtggacaatgctctgtccggcacccagaataacccgaccgctatggtcttcgagggcgat
acccagggcagtgccggtgaatatccggttatctgtaccactatacgcaccgttgagcat
agtttgggcggtcagttaacccgcaatatgcctttcctggtagaacttgccccggctgct
tatgtggaaatctccgaacagctggccagcgaaaagggtatcaaggccggtgatattgta
aaactcacttcggccagaggcagcgtatcagtggctgcagccgttaccaaacggcttaaa
cccttcagcattggcggcaaaactgttcaccaggtagccatacccaatcactggggcttt
atgggaattgcacagggtgacagtgccaacgtacttgccccgaacaccgcagactcaaat
tcctccactcctgagttcaaggcgttcttggtcaaggttgaaaaagcagccgacggtacc
gtacccaccatcaccggacgctataaggtacttgaggactaa
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