Dehalococcoides mccartyi DCMB5: dcmb_233
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Entry
dcmb_233 CDS
T02476
Symbol
rdhC
Name
(GenBank) PAS/PAC sensor signal transduction histidine kinase
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
dcmb_233 (rdhC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dmd01001
]
dcmb_233 (rdhC)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dmd02022
]
dcmb_233 (rdhC)
Enzymes [BR:
dmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
dcmb_233 (rdhC)
Protein kinases [BR:
dmd01001
]
Histidine kinases
OmpR family
dcmb_233 (rdhC)
Two-component system [BR:
dmd02022
]
OmpR family
VicK-VicR (cell wall metabolism)
dcmb_233 (rdhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_3
PAS_9
HisKA
PAS
PAS_11
HATPase_c_5
PAS_8
HATPase_c_3
PAS_4
HATPase_c_2
PAS_13
Motif
Other DBs
NCBI-ProteinID:
AGG05864
LinkDB
All DBs
Position
complement(244279..245559)
Genome browser
AA seq
426 aa
AA seq
DB search
MKMPSPERIGTADYCSQIVKIMQHNTLVGITIVDQKMHQIIRVNQALCKMLGYRKKELLG
KTMFDITHPDDMEISYKHAMKIWDDEHCYSKIIKRYSKKDGGFIWAESEGFLLKDNADNG
ILSVTFIKDITKETTLSSSTPLSISSNPASSSQENPDIDVNKLLSDEINKRKLIYNQLMV
SYENEKKLRKRIQTEMKSRLEFTRIVVHDLKTPLTSIISSSGVLSNIAADGKYKALASNI
YESTMNLNIRLDELLDMAQCEVRDPKLNKSRFNIKEMLEHIISIQQEICNTNHIVFNIVI
APEVTFIIADEDRLKQILDNLIDNAIKYSADSGIISINISHDQNNVLFSISDSGIGIEPG
EIKNIFKPYYRVENRQRKLQGLGLGLSIVRTYVKLHGGRIWVESECGKGTTFLFTIPQPP
SKATPA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgccttcaccagaacggattggaacagctgattattgcagccagattgttaaa
ataatgcagcataacactctggtaggaataactattgtggatcagaagatgcaccagata
atccgagttaaccaggctttgtgcaagatgctcggatacaggaaaaaagaacttctgggt
aaaaccatgtttgatattacccacccggatgatatggaaatcagctacaagcacgccatg
aaaatctgggacgatgaacactgttattcaaaaatcattaaacgctactcaaaaaaagac
ggcggatttatctgggcagaatcagagggctttcttttaaaagacaacgctgacaacgga
attttgagtgtcacttttataaaagatattactaaagaaaccaccttgtcatcttcaaca
cctctcagtatttcaagcaatcctgcttcatccagccaggagaaccctgacattgatgta
aacaaactattgtctgacgagattaataaacgcaaactcatttataaccagctcatggtg
tcttatgaaaatgaaaagaaactgcgcaaacgaatacagacagaaatgaaaagccgtctg
gaatttacccgaattgtagtccacgacttaaaaacaccccttacctccataatttcatcc
agcggggtactttccaatatagccgctgatggaaaatacaaggcactggcttccaatatt
tatgaaagtactatgaatttaaatatccgccttgacgaacttctggatatggctcagtgt
gaagtcagagacccaaaactaaacaaaagccgtttcaacatcaaagaaatgctggagcat
ataatctccatccagcaggaaatatgcaataccaaccatattgtttttaatatagttatt
gcacccgaagtaacgtttataattgctgatgaagaccgtttaaagcaaattctggataat
ctgatagataacgccataaaatactctgcagattccgggattatatctatcaatatcagc
catgaccagaataatgtccttttttctatttcagacagcggtatcgggatagaaccaggc
gagattaagaacatattcaagccctattaccgggtggaaaacaggcagaggaagctacaa
gggctggggctggggctcagcattgtaagaacatacgtcaaactgcatggcggacgtatc
tgggttgaaagtgaatgcggcaagggcaccaccttcctgtttaccatcccgcaaccgcca
tcaaaggcaacaccggcatga
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